Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0089.Seq
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 105 2e-23
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 105 2e-23
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 105 2e-23
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 105 2e-23
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 105 2e-23
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 82 3e-16
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 82 3e-16
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 82 3e-16
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 74 1e-13
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 48 8e-06
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 6e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 43 2e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 41 0.001
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 41 0.001
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 41 0.001
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 41 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.002
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 39 0.003
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.004
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 38 0.006
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.006
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 38 0.006
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 38 0.008
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 37 0.011
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 37 0.011
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 37 0.015
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 37 0.015
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 37 0.015
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 37 0.015
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 37 0.015
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.019
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 36 0.026
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 35 0.045
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 35 0.045
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 35 0.059
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 35 0.059
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 35 0.059
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 34 0.10
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 33 0.14
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 33 0.14
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 33 0.14
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 33 0.14
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 32 0.32
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 32 0.32
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 32 0.32
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.42
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.42
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.55
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 31 0.55
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 31 0.55
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 31 0.55
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 31 0.55
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 31 0.73
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 31 0.73
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 25 1.6
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 30 1.7
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 30 1.7
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 30 1.7
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 30 1.7
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 30 1.7
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 30 1.7
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 30 1.7
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 5.1
AF077530-1|AAC26266.1| 441|Caenorhabditis elegans Hypothetical ... 28 5.1
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 5.1
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 28 6.8
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 9.0
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 105 bits (253), Expect = 2e-23
Identities = 44/90 (48%), Positives = 67/90 (74%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 98
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
VPR++ R E++ + K+L+V+G+++D E+
Sbjct: 99 VPRDDKNRSESNVSTKRLYVSGVREDHTED 128
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLHK 649
L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ L K
Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
+RE++S FG I + V+ D T + RGFGFV F VD
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 136 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEM 195
Query: 438 KRPE 449
+ +
Sbjct: 196 SKAQ 199
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 160 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEF 252
SGD EPE+ RK+F+GGL TTD ++EF
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREF 42
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 105 bits (253), Expect = 2e-23
Identities = 44/90 (48%), Positives = 67/90 (74%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
VPR++ R E++ + K+L+V+G+++D E+
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTED 90
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLHK 649
L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ L K
Sbjct: 92 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
+RE++S FG I + V+ D T + RGFGFV F VD
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 40
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 98 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEM 157
Query: 438 KRPE 449
+ +
Sbjct: 158 SKAQ 161
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 105 bits (253), Expect = 2e-23
Identities = 44/90 (48%), Positives = 67/90 (74%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
VPR++ R E++ + K+L+V+G+++D E+
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTED 90
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLHK 649
L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ L K
Sbjct: 92 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
+RE++S FG I + V+ D T + RGFGFV F VD
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 40
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 98 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEM 157
Query: 438 KRPE 449
+ +
Sbjct: 158 SKAQ 161
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 105 bits (253), Expect = 2e-23
Identities = 44/90 (48%), Positives = 67/90 (74%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 98
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
VPR++ R E++ + K+L+V+G+++D E+
Sbjct: 99 VPRDDKNRSESNVSTKRLYVSGVREDHTED 128
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLHK 649
L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ L K
Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
+RE++S FG I + V+ D T + RGFGFV F VD
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 136 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEM 195
Query: 438 KRPE 449
+ +
Sbjct: 196 SKAQ 199
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 160 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEF 252
SGD EPE+ RK+F+GGL TTD ++EF
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREF 42
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 105 bits (253), Expect = 2e-23
Identities = 44/90 (48%), Positives = 67/90 (74%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 98
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
VPR++ R E++ + K+L+V+G+++D E+
Sbjct: 99 VPRDDKNRSESNVSTKRLYVSGVREDHTED 128
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLHK 649
L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ L K
Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
+RE++S FG I + V+ D T + RGFGFV F VD
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 136 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEM 195
Query: 438 KRPE 449
+ +
Sbjct: 196 SKAQ 199
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 160 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEF 252
SGD EPE+ RK+F+GGL TTD ++EF
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREF 42
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 82.2 bits (194), Expect = 3e-16
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
QWG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 71 QWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQM 130
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 485 TEARH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLH 646
T H LR YF TFG + V ++ G+ RG GFV ++D + DR H
Sbjct: 155 TNGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAH 203
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
L YFS +G +V V+ D T RGFGFV F
Sbjct: 65 LGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 172 YEEPEHTRKLFIGGLDYRTTDSSLKEF 252
++ P RKLFIGGL + TTD L +
Sbjct: 42 HDSPPQLRKLFIGGLSHDTTDEQLGNY 68
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 82.2 bits (194), Expect = 3e-16
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
QWG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 91 QWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQM 150
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 485 TEARH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLH 646
T H LR YF TFG + V ++ G+ RG GFV ++D + DR H
Sbjct: 175 TNGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAH 223
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
L YFS +G +V V+ D T RGFGFV F
Sbjct: 85 LGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 172 YEEPEHTRKLFIGGLDYRTTDSSLKEF 252
++ P RKLFIGGL + TTD L +
Sbjct: 62 HDSPPQLRKLFIGGLSHDTTDEQLGNY 88
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 82.2 bits (194), Expect = 3e-16
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
QWG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 92 QWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQM 151
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 485 TEARH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLH 646
T H LR YF TFG + V ++ G+ RG GFV ++D + DR H
Sbjct: 176 TNGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAH 224
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
L YFS +G +V V+ D T RGFGFV F
Sbjct: 86 LGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 172 YEEPEHTRKLFIGGLDYRTTDSSLKEF 252
++ P RKLFIGGL + TTD L +
Sbjct: 63 HDSPPQLRKLFIGGLSHDTTDEQLGNY 89
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/77 (41%), Positives = 52/77 (67%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++GE+ + +VM+DP TKR++GFGFIT+ VD+ NNR H++DG+ ++PK A P+
Sbjct: 67 RFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR-- 124
Query: 438 KRPEASATVKKLFVAGL 488
+ + KK+F+ GL
Sbjct: 125 TQAKLVTKTKKVFIGGL 141
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/64 (35%), Positives = 42/64 (65%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
+K+ E +G++ D ++M D T+R +GFGF+T+ + D+ H+I+G++VE K+A
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
Query: 420 VPRE 431
P+E
Sbjct: 210 QPKE 213
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 640
D+++YF T+G + ++ DK T + RGFGFV FD + D+VC
Sbjct: 149 DMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 637
+LR+YF FG + V+ D T + RGFGF+ F D VD+V
Sbjct: 60 NLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 154 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEF 252
++S D + K+FIGGL ++TT +L+++
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDY 64
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/77 (41%), Positives = 52/77 (67%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
++GE+ + +VM+DP TKR++GFGFIT+ VD+ NNR H++DG+ ++PK A P+
Sbjct: 67 RFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR-- 124
Query: 438 KRPEASATVKKLFVAGL 488
+ + KK+F+ GL
Sbjct: 125 TQAKLVTKTKKVFIGGL 141
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/64 (35%), Positives = 42/64 (65%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
+K+ E +G++ D ++M D T+R +GFGF+T+ + D+ H+I+G++VE K+A
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
Query: 420 VPRE 431
P+E
Sbjct: 210 QPKE 213
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 640
D+++YF T+G + ++ DK T + RGFGFV FD + D+VC
Sbjct: 149 DMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 637
+LR+YF FG + V+ D T + RGFGF+ F D VD+V
Sbjct: 60 NLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 154 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEF 252
++S D + K+FIGGL ++TT +L+++
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDY 64
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
+R FS GN++S+ +V D+ETGK +G+GF+EF D
Sbjct: 34 IRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD 68
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIV 404
I+ I + G ++ + ++ D +T + KG+GFI + + A +N +++ GRI+
Sbjct: 34 IRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRIL 89
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL YFS GN+ +V +V D+ETG+ RGF FVEF +
Sbjct: 19 DLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 640
+ L EYF FG+I V+TD+ T K RG+GFV D +R C
Sbjct: 49 KTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERAC 93
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 255 EQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 398
EQ+G+I + VV+ D T++S+G+GF+T + A + IDGR
Sbjct: 56 EQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGR 103
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 196 KLFIGGLDYRTTDSSLKEF 252
K+F+GGL Y T+D +L E+
Sbjct: 36 KIFVGGLPYHTSDKTLHEY 54
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +2
Query: 524 FSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
F FG++V++S+ D E+GK RGFGFVEFD
Sbjct: 31 FIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPREEI 437
+G++V + + D ++ + +GFGF+ + A A N ++ G+ + A P +
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKAT 93
Query: 438 KRPE 449
+R +
Sbjct: 94 ERSQ 97
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
+L +FS+ G I +V +V D+ETG+ RGF F+EF + R
Sbjct: 20 ELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 628
RDL E+FS G + V ++TD TG+ +G +VEF D + V
Sbjct: 39 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 628
RDL E+FS G + V ++TD TG+ +G +VEF D + V
Sbjct: 184 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
++ YF+ G++ +V +V D+ETG+ RGF FVEF +
Sbjct: 21 EIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LR++FS+FG I S V+ D E G+ +GFGFV F+
Sbjct: 359 LRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYD 622
L FS FG I S V+TD + GK +GFGFV F D D
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LR++FS+FG I S V+ D E G+ +GFGFV F+
Sbjct: 359 LRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYD 622
L FS FG I S V+TD + GK +GFGFV F D D
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGR 398
++R E++G+I DV + +D +++SKGFGF+ + + + A + K +DGR
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
DLR F +G+I V + DK + + +GFGFV F
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGR 398
++R E++G+I DV + +D +++SKGFGF+ + + + A + K +DGR
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
DLR F +G+I V + DK + + +GFGFV F
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/84 (33%), Positives = 37/84 (44%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
Q+GE+ V D RS+GF F+ ++ A R I G+ VE K A RE
Sbjct: 51 QYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSREN- 109
Query: 438 KRPEASATVKKLFVAGLKQDIEEE 509
KK+FV GL D E+
Sbjct: 110 ---------KKVFVGGLPSDYSEQ 124
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
+DLR +F FG + + DK+T +R F F+ F++ + D+
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
DL +F+ +G + V D+ G+ RGF FVEF
Sbjct: 44 DLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 255 EQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 428
EQ+G++ D+ D +TK + F FI + + D+A + R + K+AVP+
Sbjct: 131 EQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/84 (33%), Positives = 37/84 (44%)
Frame = +3
Query: 258 QWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 437
Q+GE+ V D RS+GF F+ ++ A R I G+ VE K A RE
Sbjct: 51 QYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSREN- 109
Query: 438 KRPEASATVKKLFVAGLKQDIEEE 509
KK+FV GL D E+
Sbjct: 110 ---------KKVFVGGLPSDYSEQ 124
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
+DLR +F FG + + DK+T +R F F+ F++ + D+
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
DL +F+ +G + V D+ G+ RGF FVEF
Sbjct: 44 DLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 255 EQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 428
EQ+G++ D+ D +TK + F FI + + D+A + R + K+AVP+
Sbjct: 131 EQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
+DLR+ F FG I +V D+ +G RGFGF+ F+
Sbjct: 90 KDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ +++G I V + DP T +GF IT+ ++A RPH IDG V+ +
Sbjct: 41 LEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEPY 100
Query: 420 VP 425
+P
Sbjct: 101 IP 102
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
+ L YF +G+I SV++ D +TG RGF + FD D ++
Sbjct: 38 KSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANK 81
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LRE S +GNI S + DK T +G+GFV+F+
Sbjct: 123 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 156
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/94 (22%), Positives = 40/94 (42%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ + ++G I + D T KG+GF+ + A +DG E +A
Sbjct: 123 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA-------VDGLNTEGVQA 175
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEET*ES 521
++++ E T L++A L D E+ E+
Sbjct: 176 -QMAKLQQQEQDPT--NLYIANLPLDFTEQMLET 206
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LRE S +GNI S + DK T +G+GFV+F+
Sbjct: 97 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 130
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/94 (22%), Positives = 40/94 (42%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 419
++ + ++G I + D T KG+GF+ + A +DG E +A
Sbjct: 97 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA-------VDGLNTEGVQA 149
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEET*ES 521
++++ E T L++A L D E+ E+
Sbjct: 150 -QMAKLQQQEQDPT--NLYIANLPLDFTEQMLET 180
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
L++ F ++GNI S V+TD E G+ +GFGFV F+
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 365
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 226 KETLEKVFAKFGNITSCEVMTVE--GKSKGFGFVAF 259
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 344
+K+ E +G I VM D + RSKGFGF+ + +
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
L++ F ++GNI S V+TD E G+ +GFGFV F+
Sbjct: 273 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 305
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 166 KETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAF 199
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 344
+K+ E +G I VM D + RSKGFGF+ + +
Sbjct: 273 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 306
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
L++ F ++GNI S V+TD E G+ +GFGFV F+
Sbjct: 270 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 302
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 163 KETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAF 196
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 344
+K+ E +G I VM D + RSKGFGF+ + +
Sbjct: 270 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 303
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
L++ F ++GNI S V+TD E G+ +GFGFV F+
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 365
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 226 KETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAF 259
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 344
+K+ E +G I VM D + RSKGFGF+ + +
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
+L F FG I++ +++D TG +G GFV FD D D
Sbjct: 143 ELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+ ++R F++ G I S +V DK TG+ G+GFV +
Sbjct: 55 QEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
++ I +G+I+ ++ D T SKG GF+ + + D A
Sbjct: 144 LESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
D+ FS +G +++++++ DK+TGK +GF F+ + D
Sbjct: 53 DVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKD 88
Score = 34.3 bits (75), Expect = 0.078
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 374
+ Q+GE++++ +++D T +SKGF F+ Y A +N
Sbjct: 57 VFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
LRE F FG++ V+ D T K +G+GFV + + +R
Sbjct: 38 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAER 78
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
++ + +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 38 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
LRE F FG++ V+ D T K +G+GFV + + +R
Sbjct: 48 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAER 88
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
++ + +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 48 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
LRE F FG++ V+ D T K +G+GFV + + +R
Sbjct: 151 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAER 191
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
++ + +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 151 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
LRE F FG++ V+ D T K +G+GFV + + +R
Sbjct: 119 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAER 159
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
++ + +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 119 LREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
++ E+F G IV ++ DK T K++ F ++EFDD ++
Sbjct: 70 EIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIE 110
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 264 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
G+IV + KD TK+ K F +I + + ++ A
Sbjct: 79 GQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
++ E+F G+IV ++ DK T K++ F ++EFDD ++
Sbjct: 76 EVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIE 116
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
+L + F+ FG+IVS V D+ T + + FGFV +D+
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDN 479
Score = 35.9 bits (79), Expect = 0.026
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDG--RIVE 407
++ + EQ+G+I + ++KD T KG F+TY Q + + G R ++
Sbjct: 45 LRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQ 104
Query: 408 PKRAVPREEIKRPEASATVKKLFVAGL-KQDIEEE 509
K A P+ KKLF+ L KQ E+E
Sbjct: 105 VKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDE 139
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
+DLR F FG I +++ DK TG +G F+ + D R
Sbjct: 43 KDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVR 85
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
+L + F+ FG+IVS V D+ T + + FGFV +D+
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDN 479
Score = 35.9 bits (79), Expect = 0.026
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDG--RIVE 407
++ + EQ+G+I + ++KD T KG F+TY Q + + G R ++
Sbjct: 45 LRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQ 104
Query: 408 PKRAVPREEIKRPEASATVKKLFVAGL-KQDIEEE 509
K A P+ KKLF+ L KQ E+E
Sbjct: 105 VKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDE 139
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
+DLR F FG I +++ DK TG +G F+ + D R
Sbjct: 43 KDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVR 85
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
DL+ F +G + V VV DK+TG +GF VEF
Sbjct: 294 DLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKK---RGFGFVEFDDYDPVDR 634
+++ F TFG + ++ + K+ G+K RGFGFV+F D R
Sbjct: 762 KEVETLFETFGAVKTIRI--PKKPGQKQQHRGFGFVDFISADEAHR 805
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
++L YF FGN++ + V ++ TG +G+ +V FD+
Sbjct: 46 KELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDN 82
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+H +LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL F+ FG I+S V DK T + FGFV +++
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+H +LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL F+ FG I+S V DK T + FGFV +++
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+H +LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL F+ FG I+S V DK T + FGFV +++
Sbjct: 443 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+H +LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+H +LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
+H +LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL F+ FG I+S V DK T + FGFV +++
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
LRE F FG + ++ D T K +G+GFV + + +R
Sbjct: 148 LREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAER 188
Score = 32.7 bits (71), Expect = 0.24
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
++ ++GE+ + +++D T + KG+GF++Y + + A
Sbjct: 148 LREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 628
++ E+F+ G + V++ DK TG ++ F FVEF + V
Sbjct: 61 EIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESV 100
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 35.1 bits (77), Expect = 0.045
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
+K ++GE+ + V++D +T++SKG+GF+++ + A
Sbjct: 151 LKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENA 192
Score = 34.7 bits (76), Expect = 0.059
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 610
L+ F+ FG + V+ D +T K +G+GFV F
Sbjct: 151 LKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 KRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 419
+R+ E++G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 420 VPREEIKRPEASATVKKLFVAGLKQDIEEE 509
P + R E +KLF+ L + EE
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEE 156
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 494 RH*RRDLREYFSTFGNIVSVSVVTDKETGKKRG 592
+H +LRE F+ FG+I SV+ D++ GK RG
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 261 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP--RE 431
+G ++ V ++ + + SKGFGF+T ++A+ + GRI+E +RA P R+
Sbjct: 74 YGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRRK 131
Query: 432 EIKRPE 449
I P+
Sbjct: 132 LINNPQ 137
Score = 34.3 bits (75), Expect = 0.078
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD--RVCLHK 649
+DL F +G ++SV +VT+ + G K GFGFV D + + R LH+
Sbjct: 65 QDLAAMFFAYGRVLSVEIVTN-DRGSK-GFGFVTLDSIESCEKARAALHE 112
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 34.7 bits (76), Expect = 0.059
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
LR F +G I +++V D E GK RG+ F+E+ D
Sbjct: 120 LRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSD 153
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 136 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSL-KEF*SNGE 267
I P+E+ E+P T LF+G ++Y T++S L +EF + G+
Sbjct: 87 IATWNPAENPRASEDPYRT--LFVGRINYETSESKLRREFEAYGK 129
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 261 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP--RE 431
+G ++ V ++ + + SKGFGF+T ++A+ + GRI+E +RA P R+
Sbjct: 74 YGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRRK 131
Query: 432 EIKRPE 449
I P+
Sbjct: 132 LINNPQ 137
Score = 34.3 bits (75), Expect = 0.078
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD--RVCLHK 649
+DL F +G ++SV +VT+ + G K GFGFV D + + R LH+
Sbjct: 65 QDLAAMFFAYGRVLSVEIVTN-DRGSK-GFGFVTLDSIESCEKARAALHE 112
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL FS FG I + +V D+ +G + F+EFD+
Sbjct: 256 DLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL FS FG I + +V D+ +G + F+EFD+
Sbjct: 256 DLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL FS FG I + +V D+ +G + F+EFD+
Sbjct: 187 DLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 521 YFST-FGNIVSVSVVTDKETGKKRGFGFVEF 610
+FS G + +V +V DK+TGK +GF FV F
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +3
Query: 255 EQWGEIVDVVVMKDPKTK---RSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVP 425
+++ E + VV + K K SKGFGF+ S ++ H IDGR + K
Sbjct: 190 QKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDG 249
Query: 426 REEIKRPEASATVKKLFVAGLKQDIEE 506
R++ RP ++ ++FV L ++E
Sbjct: 250 RDKQGRP----SISRIFVGRLTDKVDE 272
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL F+ FG I+S V DK T + FGFV +++
Sbjct: 350 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKR 416
+K + E++G + DV ++ + + SKGFGF+T + + A Q I+GR +E
Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Query: 417 AVPREEIKR 443
A R K+
Sbjct: 227 ATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKR 416
+K + E++G + DV ++ + + SKGFGF+T + + A Q I+GR +E
Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Query: 417 AVPREEIKR 443
A R K+
Sbjct: 227 ATARVHSKK 235
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 392 RKNCRAKTSSSKGRD*KTRS*CHR*KVVCSWTEARH*RRDLREYFSTFGNIVSVSVVTDK 571
R R + +S R RS +VV + L E FS +G I +V + D+
Sbjct: 109 RSGSRQRRRASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDR 168
Query: 572 -ETGKKRGFGFVEFDDYDPVDRVCLH 646
RG+G+VE+D+ + ++ H
Sbjct: 169 FHNHVHRGYGYVEYDNLEDAEKSIKH 194
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP 425
+ E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE A
Sbjct: 1 MFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 58
Query: 426 REEIKRPEASATV 464
R K+ + +V
Sbjct: 59 RVHNKKAKPLMSV 71
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 524 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
F G +V V ++ + E G K GFGFV + D DR
Sbjct: 2 FEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADR 36
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP 425
+ E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE A
Sbjct: 119 MFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 176
Query: 426 REEIKRPEASATV 464
R K+ + +V
Sbjct: 177 RVHNKKAKPLMSV 189
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
DL F G +V V ++ + E G K GFGFV + D DR
Sbjct: 115 DLTAMFEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADR 154
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP 425
+ E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE A
Sbjct: 119 MFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 176
Query: 426 REEIKRPEASATV 464
R K+ + +V
Sbjct: 177 RVHNKKAKPLMSV 189
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 634
DL F G +V V ++ + E G K GFGFV + D DR
Sbjct: 115 DLTAMFEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADR 154
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +1
Query: 169 DYEEPEHTRKLFIGGLDYRTTDSSLKE 249
DY P +RK+F+GG+ + T+++LK+
Sbjct: 287 DYTSPTFSRKIFVGGVPWDITEAALKD 313
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 536 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
G +VSV++ D+ T +GFGFVEF + D
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVP 425
++ Q G +V V + KD T +GFGF+ + D A + K+ G+ ++ +A
Sbjct: 32 LMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASA 91
Query: 426 REEIKRPEASATVKKLFVAGLKQDIEEE 509
E K + A + FV L +++E+
Sbjct: 92 HE--KNMDVGANI---FVGNLDPEVDEK 114
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 536 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 631
G +VSV++ D+ T +GFGFVEF + D
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVP 425
++ Q G +V V + KD T +GFGF+ + D A + K+ G+ ++ +A
Sbjct: 42 LMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASA 101
Query: 426 REEIKRPEASATVKKLFVAGLKQDIEEE 509
E K + A + FV L +++E+
Sbjct: 102 HE--KNMDVGANI---FVGNLDPEVDEK 124
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 249 ILEQWGEIVDVVVMKDPKTKRSKGFGFITY 338
+ E+ G+I D+ +M DP + S+G+ F+TY
Sbjct: 219 LFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 640
R D+ E F FG I++V+ ++GFGFV+F++ D C
Sbjct: 97 RDDIIELFRPFGKIIAVNYFA------QQGFGFVQFNEAGSADESC 136
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LR F FG I S+++ D TG + F FVE++
Sbjct: 118 LRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL+ F FG IV + RGFG++EF++
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
+K + E +GEIV + + P + +GFG++ ++ EA
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LR F FG I S+++ D TG + F FVE++
Sbjct: 118 LRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL+ F FG IV + RGFG++EF++
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
+K + E +GEIV + + P + +GFG++ ++ EA
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 512 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 613
LR F FG I S+++ D TG + F FVE++
Sbjct: 118 LRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
DL+ F FG IV + RGFG++EF++
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 365
+K + E +GEIV + + P + +GFG++ ++ EA
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 503 RRDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVE 607
RR EYFS V++ + T +E K+RG+ FVE
Sbjct: 107 RRTDYEYFSANYRTVTIRIETSEEDRKQRGYQFVE 141
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 509 DLREYFS-TFGNIVSVSVVTDKETGKKRGFGFVEFDDYD 622
+L +F T+G++V V + D + RG G V F DYD
Sbjct: 301 ELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYD 339
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 260 MGRNCRCSCNERPKNQEIKRI 322
M NCR SCN E++R+
Sbjct: 634 MAENCRSSCNSCYTQSELRRM 654
Score = 23.8 bits (49), Expect(2) = 1.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 245 KNSRAMGRNCRCSC 286
KN+R M NCR SC
Sbjct: 586 KNTRYMACNCRVSC 599
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
++ ++F G++ V++ D+ +G +GF +VEF +
Sbjct: 93 EIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 270 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 449
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 450 ASATVKKLFV 479
+A K+ +V
Sbjct: 1804 ETARFKRSYV 1813
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 270 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 449
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 98 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 157
Query: 450 ASATVKKLFV 479
+A K+ +V
Sbjct: 158 ETARFKRSYV 167
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 270 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 449
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 179 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 238
Query: 450 ASATVKKLFV 479
+A K+ +V
Sbjct: 239 ETARFKRSYV 248
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 270 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 449
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 184 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 243
Query: 450 ASATVKKLFV 479
+A K+ +V
Sbjct: 244 ETARFKRSYV 253
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 270 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 449
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 450 ASATVKKLFV 479
+A K+ +V
Sbjct: 1804 ETARFKRSYV 1813
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 270 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 449
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 450 ASATVKKLFV 479
+A K+ +V
Sbjct: 1804 ETARFKRSYV 1813
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
+D+ +F +G I V + K GFGFVEFDD
Sbjct: 17 KDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
+D+ +F +G I V + K GFGFVEFDD
Sbjct: 17 KDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 506 RDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 616
+D+ +F +G I V + K GFGFVEFDD
Sbjct: 17 KDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 398
++ E++ + DV ++K +SKG+GFIT+ +E + P +++ R
Sbjct: 82 LREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKLTPKQLEFR 133
>AF077530-1|AAC26266.1| 441|Caenorhabditis elegans Hypothetical
protein C40D2.3 protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -1
Query: 658 FGDFVQAYSVNWIIIIKLYKTKAPFLSCFFICHNTNRNNIS---KCTKILSQVSSSMSCF 488
F D + Y+V W + I+ Y K FL +C + S +C L +SS C+
Sbjct: 166 FSDIEEHYNVPWRLRIQKY--KKGFLGIHLLCEKETCDGRSWSIQCDYELQLISSKGKCY 223
Query: 487 S-PATNNF 467
S +T NF
Sbjct: 224 SRHSTFNF 231
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 240 IKRILEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 398
++ E++ + DV ++K +SKG+GFIT+ +E + P +++ R
Sbjct: 83 LREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKLTPKQLEFR 134
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 390 DGRIVEPKRAVPREEIKRPEASATVKKLFVAG 485
+G + +PK+ V ++ +K+ + A +KKL VAG
Sbjct: 323 EGVLPKPKKKVVKKVVKKKKPIAFIKKLEVAG 354
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 509 DLREYFSTFGNIVSVSVVTDKETGKKR 589
D+R+ FSTFG I +S +K+ +KR
Sbjct: 199 DIRKLFSTFGIISHISSAIEKKDRRKR 225
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 389 NFVRPIILSFINHMGLRICNKSKSF*SLGFWVFHY 285
NF P IL+ N+MG+RI + S LG ++ Y
Sbjct: 514 NFTNPDILTNGNNMGVRISDDSMYGVQLGLYIVGY 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,047,840
Number of Sequences: 27780
Number of extensions: 275133
Number of successful extensions: 1159
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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