Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0088.Seq
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 43 3e-04
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 40 0.002
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 40 0.002
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 40 0.002
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 39 0.003
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 37 0.017
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 36 0.030
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 36 0.030
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 36 0.030
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 36 0.030
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 35 0.053
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 35 0.053
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 35 0.070
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 35 0.070
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 34 0.093
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 34 0.093
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 34 0.093
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 33 0.16
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 33 0.21
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 33 0.21
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 32 0.37
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 32 0.49
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 31 0.65
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 30 2.0
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 26 5.4
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 50.0 bits (114), Expect = 2e-06
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRRSLL 90
L C+H++H SCI PWL H TCP+C+ +L
Sbjct: 243 LPCKHIYHKSCIDPWLLEHRTCPMCKNDIL 272
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 46.4 bits (105), Expect = 2e-05
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRRSL 87
L+C H+FH CI PWL+ +CP+CR+ +
Sbjct: 254 LDCNHIFHRPCIEPWLKTKNSCPVCRQKV 282
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ECEHLFHSSCISPWLQLHATCPICRRSLL-PADPPP 108
EC FHS C + WL CP CR+ +L P+D PP
Sbjct: 459 ECRRRFHSKCATKWLNEKRECPTCRKLMLNPSDYPP 494
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ECEHLFHSSCISPWLQLHATCPICRRSLL-PADPPP 108
EC FH C + WL CP CR+ LL PAD PP
Sbjct: 752 ECRRRFHLKCATKWLNEKRECPTCRKLLLNPADYPP 787
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 41.9 bits (94), Expect = 5e-04
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRRSL 87
L C H+FH CI WL ++ CP+CR +
Sbjct: 449 LRCNHVFHPECIYKWLDINKRCPMCREEI 477
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 41.1 bits (92), Expect = 8e-04
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRRSL 87
L C H+FH+ C+ W Q TCP CR +
Sbjct: 308 LPCSHVFHAHCLRSWFQRQQTCPTCRTDI 336
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICR 78
LEC H+F CI WL +TCPICR
Sbjct: 350 LECTHVFCKFCIETWLDQKSTCPICR 375
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ECEHLFHSSCISPWLQLHATCPICRRSLL-PADPPP 108
+C FH C + WL CP CR+ LL P+D PP
Sbjct: 1043 QCRRRFHLECATKWLNEKRECPTCRKLLLNPSDYPP 1078
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 ECEHLFHSSCISPWLQLHATCPICRRSLL-PADPPP 108
+C FH C + WL CP CR+ LL P+D PP
Sbjct: 1077 QCRRRFHLECATKWLNEKRECPTCRKLLLNPSDYPP 1112
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 LECEHLFHSSCISPWL-QLHATCPICRRSL 87
L C H+FH +CI WL Q CP+C+R +
Sbjct: 263 LPCRHVFHCNCIDVWLTQTRKICPLCKRKI 292
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 39.1 bits (87), Expect = 0.003
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRRSL 87
+ C+H FH C++ WL+ TCP CR+ +
Sbjct: 109 MPCKHRFHYFCLTLWLEAQQTCPTCRQKV 137
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 38.7 bits (86), Expect = 0.004
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSL 87
C H++H CIS W+ CP CRR++
Sbjct: 31 CGHIYHHGCISQWIATKRQCPSCRRTV 57
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.017
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICR 78
L C H FH C+ PWL CP+C+
Sbjct: 333 LFCGHEFHPKCVDPWLLSKRRCPLCQ 358
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSL 87
C +H CIS WL++++ CP C R+L
Sbjct: 2126 CTREYHYHCISRWLKINSVCPQCSRAL 2152
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSL 87
C +H CIS WL++++ CP C R+L
Sbjct: 2126 CTREYHYHCISRWLKINSVCPQCSRAL 2152
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPIC 75
L C H FH C+ WL TCP C
Sbjct: 111 LPCMHSFHQECVDEWLMKSFTCPSC 135
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 35.9 bits (79), Expect = 0.030
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 4 ECEHLFHSSCISPWLQLHATCPICRR 81
+C H FH C++ W++ + CP+C++
Sbjct: 78 DCNHSFHHCCMTQWIRQNNRCPLCQK 103
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 35.9 bits (79), Expect = 0.030
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPIC 75
C+H FH C+ WL + CP+C
Sbjct: 620 CKHYFHGPCLRKWLAVKMVCPLC 642
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.053
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICR 78
L C H FH C+ WL ++CP CR
Sbjct: 348 LPCSHQFHDWCLMWWLAQDSSCPTCR 373
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.053
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICR 78
L C H FH C+ WL ++CP CR
Sbjct: 348 LPCSHQFHDWCLMWWLAQDSSCPTCR 373
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.053
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSL 87
C H F SC+ WL+ TCP+CR ++
Sbjct: 54 CGHTFCYSCLFDWLKSQDTCPMCREAV 80
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 34.7 bits (76), Expect = 0.070
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRR 81
C H FH CIS WL+ CP+ R
Sbjct: 77 CNHAFHFHCISRWLKTRQVCPLDNR 101
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 34.7 bits (76), Expect = 0.070
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRR 81
C H FH CIS WL+ CP+ R
Sbjct: 68 CNHAFHFHCISRWLKTRQVCPLDNR 92
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 34.3 bits (75), Expect = 0.093
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSLLPADPPP 108
C+ +H++C+ W ++ CP C LL + P
Sbjct: 919 CKRQYHTTCVQKWFKIKRICPTCNAGLLDENEFP 952
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 34.3 bits (75), Expect = 0.093
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 4 ECEHLFHSSCISPWLQL--HATCPICRRS 84
+C++ FHS+C+ W + +TCP+CR +
Sbjct: 1416 QCKNKFHSNCLYKWFESSNQSTCPLCRNN 1444
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 34.3 bits (75), Expect = 0.093
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSLL-PADPP 105
C FH C S W + + CP C R +L P + P
Sbjct: 157 CRRRFHLDCASQWFKEKSVCPACNRGMLDPTEFP 190
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 7 CEHLFHSSCISPWL--QLHATCPICRRSL 87
C H F SCIS W+ L +CP+CR+ +
Sbjct: 85 CNHSFCFSCISEWVCQSLRPSCPMCRKDV 113
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Frame = +1
Query: 7 CEHLFHSSCISPWL-----QLHATCPICRR 81
C H FH CI W+ Q A CP+CR+
Sbjct: 100 CRHAFHRHCIDKWIAAPTNQPRAQCPLCRQ 129
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICR 78
C H FH+ C+ W TCP+CR
Sbjct: 276 CNHSFHARCLEQWAD--NTCPVCR 297
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 33.1 bits (72), Expect = 0.21
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRRSLL 90
L+C+ +H+ C W ++ CP C LL
Sbjct: 536 LDCKRKYHTGCAQKWFKVKRICPTCDAGLL 565
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 32.3 bits (70), Expect = 0.37
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPIC 75
C ++HS C + WL TCP C
Sbjct: 547 CTEIYHSHCATQWLSQKPTCPKC 569
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 1 LECEHLFHSSCISPWL--QLHATCPICR 78
L C H+FH C+ +L + TCP CR
Sbjct: 391 LRCSHIFHEKCLHTYLLQRTDQTCPKCR 418
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLH--ATCPICR 78
L C H+FH CI W+ + TCP C+
Sbjct: 331 LSCGHVFHEFCIRGWVVVGKLQTCPYCK 358
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 31.5 bits (68), Expect = 0.65
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSLL 90
C+ +H+ C W ++ CP C LL
Sbjct: 910 CKRQYHTGCAQKWFKVKRICPTCNSGLL 937
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICR 78
L C+H + C WL + CP+CR
Sbjct: 40 LTCKHSICAGCAGRWLSSCSVCPMCR 65
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICR 78
+EC H + CI L ++ CP+CR
Sbjct: 21 IECGHSYCRFCIESHLNINEKCPLCR 46
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQLHATCPICRRSLL 90
C H C +P LQ CP C++ +L
Sbjct: 675 CTKSIHEKCAAPLLQQSVMCPTCKQRML 702
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 7 CEHLFHSSCISPWLQL---HATCPICRRSL 87
C HLF C+S WL + CP+C+ ++
Sbjct: 41 CGHLFCWPCLSQWLDTRPNNQVCPVCKSAI 70
>Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical
protein C17E4.3 protein.
Length = 431
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +1
Query: 16 LFHSSCISPWLQLHAT--CPICR 78
LFH SC+ WL L +T C IC+
Sbjct: 46 LFHRSCLEHWLTLTSTTNCEICK 68
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 1 LECEHLFHSSCISPWLQLHATCPICRR 81
L C+H F CI L L CP C++
Sbjct: 113 LRCQHSFCKKCIDQCLPLTRKCPSCQQ 139
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 26.2 bits (55), Expect(2) = 5.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 600 VCRSGSCECW 629
+CR G CECW
Sbjct: 91 LCRDGKCECW 100
Score = 20.6 bits (41), Expect(2) = 5.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 591 ISSVCRSGSCEC 626
++SVCR+ C C
Sbjct: 44 MNSVCRNSRCTC 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,486,007
Number of Sequences: 27780
Number of extensions: 182004
Number of successful extensions: 579
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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