Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0086.Seq
(529 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC115380-1|AAI15381.1| 706|Homo sapiens FBXL10 protein protein. 32 1.4
BC115379-1|AAI15380.1| 559|Homo sapiens FBXL10 protein protein. 32 1.4
AL691432-5|CAM12834.1| 386|Homo sapiens matrix metallopeptidase... 32 1.4
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 32 1.4
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 32 1.4
AB010962-1|BAA24834.1| 386|Homo sapiens MIFR-2 protein. 32 1.4
AL021808-2|CAB36861.1| 971|Homo sapiens POM121 membrane glycopr... 31 2.5
AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting... 29 7.6
AF076431-1|AAD51089.1| 140|Homo sapiens collagen overlapping tr... 29 7.6
>BC115380-1|AAI15381.1| 706|Homo sapiens FBXL10 protein protein.
Length = 706
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -3
Query: 206 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 45
+NR V P + S V+ RRR CR E C R C C FC
Sbjct: 578 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 630
>BC115379-1|AAI15380.1| 559|Homo sapiens FBXL10 protein protein.
Length = 559
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -3
Query: 206 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 45
+NR V P + S V+ RRR CR E C R C C FC
Sbjct: 461 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 513
>AL691432-5|CAM12834.1| 386|Homo sapiens matrix metallopeptidase
23B protein.
Length = 386
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = -3
Query: 356 AEAAAPRVRTLRPATTRLRITVYYGMLRLLPVDWTHSTAERVTLCLTWLTENRPVKCPTP 177
A AAP +R R A R+R+ G+LR P + +++ L L + P P
Sbjct: 268 AVGAAPALRMPRQAV-RVRVLGAEGLLRRSPAAHEEALPQQLRLLL---------RIPLP 317
Query: 176 RNAHRSVVRSDRQTLALRGRRRGVSCRPAE 87
H D+ RG+ R + RP +
Sbjct: 318 HGGHHPTAPQDQNQAGARGQERDLPLRPED 347
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -3
Query: 206 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 45
+NR V P + S V+ RRR CR E C R C C FC
Sbjct: 578 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 630
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 31.9 bits (69), Expect = 1.4
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -3
Query: 206 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 45
+NR V P + S V+ RRR CR E C R C C FC
Sbjct: 99 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 151
>AB010962-1|BAA24834.1| 386|Homo sapiens MIFR-2 protein.
Length = 386
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = -3
Query: 356 AEAAAPRVRTLRPATTRLRITVYYGMLRLLPVDWTHSTAERVTLCLTWLTENRPVKCPTP 177
A AAP +R R A R+R+ G+LR P + +++ L L + P P
Sbjct: 268 AVGAAPALRMPRQAV-RVRVLGAEGLLRRSPAAHEEALPQQLRLLL---------RIPLP 317
Query: 176 RNAHRSVVRSDRQTLALRGRRRGVSCRPAE 87
H D+ RG+ R + RP +
Sbjct: 318 HGGHHPTAPQDQNQAGARGQERDLPLRPED 347
>AL021808-2|CAB36861.1| 971|Homo sapiens POM121 membrane
glycoprotein-like 2 (rat) protein.
Length = 971
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 4 RADLPERFAKERIQQNSHERHDAARPHRSAGRQLTPRRRPLKAR 135
R DLPER K R Q H+ H HR+ PR RP++ R
Sbjct: 19 RTDLPERPTKRRPPQPLHQVHRVQFVHRA---HPAPRYRPVRRR 59
>AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting
protein kinase 2 protein.
Length = 1171
Score = 29.5 bits (63), Expect = 7.6
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 4/153 (2%)
Frame = -2
Query: 501 TIQTDRRRTAVNV--RPTLTLTNQNLHFRH--HLTICTLDKSHLRLHL*GYGSGGRGPKS 334
TI D+R T + P +T+T+ L F H H+ C + + + Y + + K+
Sbjct: 509 TIDADKRITPIETLNHPFVTMTHL-LDFPHSTHVKSCFQNMEICKRRVNMYDTVNQS-KT 566
Query: 333 PHVTSRDNQVTNHSLLRNAKTFTRRLDAQYCRTRYAVSHMADGKQTG*VSDTAQRTPQRC 154
P +T + + + T + + AV+ + QTG A+ P +
Sbjct: 567 PFITHVAPSTSTNLTMTFNNQLTTVHNQPSAASMAAVAQRSMPLQTGTAQICARPDPFQQ 626
Query: 153 AIRSTDPSFKRPAARRQLPAGRTVRARGIVPFV 55
A+ P F+ A AG +VR VP V
Sbjct: 627 ALIVCPPGFQGLQASPSKHAGYSVRMENAVPIV 659
>AF076431-1|AAD51089.1| 140|Homo sapiens collagen overlapping
transcript 1 protein.
Length = 140
Score = 29.5 bits (63), Expect = 7.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 121 AGGAASVAGRQNGAGARHRA 62
AGGA +A R+ G G RHRA
Sbjct: 78 AGGAGPLASRRQGVGRRHRA 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,714,937
Number of Sequences: 237096
Number of extensions: 1593794
Number of successful extensions: 4124
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4119
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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