Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0086.Seq
         (529 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   5.2  
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    28   6.8  
AY094904-1|AAM11257.1|  214|Drosophila melanogaster RH09640p pro...    28   6.8  
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    28   6.8  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = -3

Query: 197  PVKCPTPRNAHRSVVRSDRQTLALRGR--RRGVSCR-PAERCGRAASCRSCEFC 45
            P  C T  NAH   +   +Q L   G      V+C+ P   CGR   C+S + C
Sbjct: 3161 PTACGT--NAHCQTIDHRKQCLCPEGLDGNANVACKVPRIACGRNEDCQSNQLC 3212


>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p
           protein.
          Length = 2486

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 121 AGGAASVAGRQNGAGARHRAV 59
           AGG AS+AG Q+G GA   AV
Sbjct: 230 AGGTASIAGNQSGFGAGSGAV 250


>AY094904-1|AAM11257.1|  214|Drosophila melanogaster RH09640p
           protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +1

Query: 10  DLPERFAKERIQQNSHERHDAARPHRSAGRQLTPRRRPLKARVC 141
           +LPE++ KER Q +  ER  A    R  G       R  +A  C
Sbjct: 150 ELPEQYEKERWQMSDDERMLATSTLRERGNNFYKASRFTEAETC 193


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
           protein.
          Length = 2486

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 121 AGGAASVAGRQNGAGARHRAV 59
           AGG AS+AG Q+G GA   AV
Sbjct: 230 AGGTASIAGNQSGFGAGSGAV 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,179,190
Number of Sequences: 53049
Number of extensions: 520673
Number of successful extensions: 1639
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)