Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0082.Seq
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   9.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   9.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = -1

Query: 438 RWGCVRTRATE*WNFGN----F*YILECSLQIET 349
           RW  +R+R +  +  G     F  I+ECSL +ET
Sbjct: 127 RWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLET 160


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 365 EHSRIYQKFPKFHYSVARVRTQPHRC 442
           ++ R YQK+ +     +R RT+  RC
Sbjct: 51  KNEREYQKYRETSKERSRDRTERERC 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,679
Number of Sequences: 438
Number of extensions: 4939
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)