Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0080.Seq
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    26   0.65 
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       25   1.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.1  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.0  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +2

Query: 89  NAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAHQTR 268
           N+    GV   LS + P   +    R  L K+ A   AES     K   ++   NAH  +
Sbjct: 13  NSLLADGVTAYLSPIQPGARKGHLGRYELEKETAHRMAESMDTSHKPNPLEQKTNAHIEK 72

Query: 269 VMRV 280
           +  +
Sbjct: 73  IFLI 76


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = +2

Query: 158 SSRPSLFKDDALNHAESKINEDKLQKIDD-DKNAHQ-----TRVMRVLSPTVLLKRTTNL 319
           S + ++ K   + H     + ++ QKI+D  KN        T  M  L+P + L++  N 
Sbjct: 55  SGKSTIVKQMRILHVNGFSDSERKQKIEDIKKNIRDAILTITGAMSTLTPPIQLEKPENQ 114

Query: 320 KRLD 331
            R+D
Sbjct: 115 ARVD 118


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 173  LFKDDALNHAESKINEDKLQKIDDDKNAHQTRVMRV 280
            + K  AL+  ES INE  +  I +  N HQ   +R+
Sbjct: 895  IHKKLALSTEESSINEILMNSIQEQINYHQVSNIRL 930


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +2

Query: 185 DALNHAESKINEDKLQKIDDDKNAHQTRVMRVLSPTVLLKRTTNLKRLDRCS 340
           +AL  +    N D+L + D+D+N   TR     + + +  R+++L R   CS
Sbjct: 244 EALVKSSLDPNSDRLTEDDEDENISVTR-----TNSTIRSRSSSLSRSRSCS 290


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 16/70 (22%), Positives = 25/70 (35%)
 Frame = +2

Query: 47   GNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDK 226
            G  A  A  P P    H L   PP + +  P   QP    P+      +   E  +N   
Sbjct: 909  GPGAAAATGPPP--PTHRLEQ-PPQVVAAAPTQQQPLPPAPAAASSAGVQPTEHSVNSTN 965

Query: 227  LQKIDDDKNA 256
            +  I+   ++
Sbjct: 966  VTSINSSSSS 975


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 346 PIQFDLDELAGAFLANNQKGRMNCVVE 426
           PIQ DLD++  A       G   CV E
Sbjct: 462 PIQLDLDDVIDAPPIGRNPGHERCVDE 488


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 180 LKRLGREDDGWLVSGNTEDSMGGT 109
           L R     +GWL +GN    +G T
Sbjct: 17  LNRTNYYQEGWLATGNVRGIVGVT 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,186
Number of Sequences: 2352
Number of extensions: 9033
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)