BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0080.Seq
(514 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC128137-1|AAI28138.1| 417|Homo sapiens protein phosphatase 4, ... 30 4.1
BC128136-1|AAI28137.1| 417|Homo sapiens protein phosphatase 4, ... 30 4.1
BC110889-1|AAI10890.1| 360|Homo sapiens PPP4R2 protein protein. 30 4.1
BC100281-1|AAI00282.1| 271|Homo sapiens PPP4R2 protein protein. 30 4.1
AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4 r... 30 4.1
AF327345-1|AAL56006.1| 417|Homo sapiens hypothetical protein SB... 30 4.1
BC133012-1|AAI33013.1| 135|Homo sapiens FLJ40142 protein protein. 30 5.5
BC133010-1|AAI33011.1| 135|Homo sapiens FLJ40142 protein protein. 30 5.5
AK097461-1|BAC05063.1| 135|Homo sapiens protein ( Homo sapiens ... 30 5.5
L07032-1|AAA60101.1| 706|Homo sapiens protein kinase C-theta pr... 29 9.5
L01087-1|AAA75571.1| 706|Homo sapiens protein kinase C-theta pr... 29 9.5
BC113359-1|AAI13360.1| 706|Homo sapiens protein kinase C, theta... 29 9.5
BC101465-1|AAI01466.1| 706|Homo sapiens protein kinase C, theta... 29 9.5
AY702977-1|AAU29340.1| 643|Homo sapiens protein kinase C theta ... 29 9.5
AL158043-2|CAC12904.2| 706|Homo sapiens protein kinase C, theta... 29 9.5
AL137145-2|CAC10200.2| 706|Homo sapiens protein kinase C, theta... 29 9.5
>BC128137-1|AAI28138.1| 417|Homo sapiens protein phosphatase 4,
regulatory subunit 2 protein.
Length = 417
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 116 PMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAH 259
PM ++ LPE++ S +L +++ NH++S +E ++ + KN H
Sbjct: 187 PMTTNGLPESTD--SKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKH 232
>BC128136-1|AAI28137.1| 417|Homo sapiens protein phosphatase 4,
regulatory subunit 2 protein.
Length = 417
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 116 PMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAH 259
PM ++ LPE++ S +L +++ NH++S +E ++ + KN H
Sbjct: 187 PMTTNGLPESTD--SKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKH 232
>BC110889-1|AAI10890.1| 360|Homo sapiens PPP4R2 protein protein.
Length = 360
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 116 PMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAH 259
PM ++ LPE++ S +L +++ NH++S +E ++ + KN H
Sbjct: 130 PMTTNGLPESTD--SKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKH 175
>BC100281-1|AAI00282.1| 271|Homo sapiens PPP4R2 protein protein.
Length = 271
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 116 PMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAH 259
PM ++ LPE++ S +L +++ NH++S +E ++ + KN H
Sbjct: 131 PMTTNGLPESTD--SKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKH 176
>AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4
regulatory subunit 2 protein.
Length = 495
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 116 PMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAH 259
PM ++ LPE++ S +L +++ NH++S +E ++ + KN H
Sbjct: 265 PMTTNGLPESTD--SKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKH 310
>AF327345-1|AAL56006.1| 417|Homo sapiens hypothetical protein
SBBI57 protein.
Length = 417
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 116 PMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEDKLQKIDDDKNAH 259
PM ++ LPE++ S +L +++ NH++S +E ++ + KN H
Sbjct: 187 PMTTNGLPESTD--SKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKH 232
>BC133012-1|AAI33013.1| 135|Homo sapiens FLJ40142 protein protein.
Length = 135
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 93 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 179
P C++ CCL C L +ASR +H V S
Sbjct: 31 PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59
>BC133010-1|AAI33011.1| 135|Homo sapiens FLJ40142 protein protein.
Length = 135
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 93 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 179
P C++ CCL C L +ASR +H V S
Sbjct: 31 PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59
>AK097461-1|BAC05063.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ40142 fis, clone TESTI2012922. ).
Length = 135
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 93 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 179
P C++ CCL C L +ASR +H V S
Sbjct: 31 PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59
>L07032-1|AAA60101.1| 706|Homo sapiens protein kinase C-theta
protein.
Length = 706
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
>L01087-1|AAA75571.1| 706|Homo sapiens protein kinase C-theta
protein.
Length = 706
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
>BC113359-1|AAI13360.1| 706|Homo sapiens protein kinase C, theta
protein.
Length = 706
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
>BC101465-1|AAI01466.1| 706|Homo sapiens protein kinase C, theta
protein.
Length = 706
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
>AY702977-1|AAU29340.1| 643|Homo sapiens protein kinase C theta
protein.
Length = 643
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
>AL158043-2|CAC12904.2| 706|Homo sapiens protein kinase C, theta
protein.
Length = 706
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
>AL137145-2|CAC10200.2| 706|Homo sapiens protein kinase C, theta
protein.
Length = 706
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 110 LHAKRGHLLVAKAHPLPGHHFRRLCLPKRVLCRALH 3
LH +RG + AK H + H F P+ C H
Sbjct: 142 LHQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCH 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,317,216
Number of Sequences: 237096
Number of extensions: 1365848
Number of successful extensions: 7479
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7477
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -