Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0080.Seq
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 31 0.64
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 30 0.85
Z81072-3|CAB03022.1| 486|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 4.5
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 4.5
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 4.5
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 30.7 bits (66), Expect = 0.64
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 RAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALN-HAESKI 214
+ Y ND + P P +L +PP S + + P+ S PS K N ++S +
Sbjct: 111 KVYSNDPRLVSIPRPAGTIPSLGSMPPSRSGSI--ITGPNPSPPSSQKRKNKNKESKSSL 168
Query: 215 NEDKLQKIDDDKN 253
N+ K ++ + KN
Sbjct: 169 NKPKRNRLQELKN 181
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 203 ESKINEDKLQKIDDDKNAHQTRVMRVLSPTVLLKRTTNLKRL 328
+SKIN++KL KI++DK A + + + + K +K L
Sbjct: 716 DSKINQEKLNKINNDKKARKNYELNKIESIINKKNMDIIKSL 757
>Z81072-3|CAB03022.1| 486|Caenorhabditis elegans Hypothetical
protein F30A10.4 protein.
Length = 486
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 182 DDALNHAESKINEDKLQKIDDDKNAHQTRVMRVLSPTVLLKR 307
D +N+ K++E+KL ++ D ++ Q R+ R + P LKR
Sbjct: 113 DTYVNNGRMKLDEEKLFQLSMDCDSIQNRIFRDMPPFEKLKR 154
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 316 VRRPLQQNCRTQDSHHSSLVSILIVVNFLQFVFVYFGL 203
+ P +N Q S L+S I++ F F+FV+FGL
Sbjct: 181 IMMPYNENNTIQWKALSLLISAGILICFQYFIFVFFGL 218
>Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical
protein D2030.6 protein.
Length = 824
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 44 YGNDALVADEPLPLANAHALH-GVPPMLSSVLPETSQPSSSRPSLFKD 184
YG + V D+P+ ++ G PP +S ++PE P+ + KD
Sbjct: 292 YGIEITVDDQPIIISEGKPKQPGEPPQVSYIVPELCFPTGLTDEMRKD 339
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 11 LDKELALEGRAYGN-DALVADEPLPL---ANAHALHGVPPMLSSVLPETSQPSSSR 166
L + L+ E R+Y + + L+ E P+ +N +L SS+L +T QPSSSR
Sbjct: 8 LQRSLSHEMRSYSSLNPLLPSEDTPIQSFSNGVSLEEGKQASSSLLRDTGQPSSSR 63
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 11 LDKELALEGRAYGN-DALVADEPLPL---ANAHALHGVPPMLSSVLPETSQPSSSR 166
L + L+ E R+Y + + L+ E P+ +N +L SS+L +T QPSSSR
Sbjct: 8 LQRSLSHEMRSYSSLNPLLPSEDTPIQSFSNGVSLEEGKQASSSLLRDTGQPSSSR 63
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 346 PIQFDLDELAGAFLANNQKGRMNCVVERRNDDPLE 450
P+ ++ EL G A N+ + C++++R+ +P+E
Sbjct: 1635 PLAWENVELLGDLAAANKTAIVQCLIDKRSPNPIE 1669
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 346 PIQFDLDELAGAFLANNQKGRMNCVVERRNDDPLE 450
P+ ++ EL G A N+ + C++++R+ +P+E
Sbjct: 1673 PLAWENVELLGDLAAANKTAIVQCLIDKRSPNPIE 1707
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 346 PIQFDLDELAGAFLANNQKGRMNCVVERRNDDPLE 450
P+ ++ EL G A N+ + C++++R+ +P+E
Sbjct: 1635 PLAWENVELLGDLAAANKTAIVQCLIDKRSPNPIE 1669
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,863,199
Number of Sequences: 27780
Number of extensions: 208600
Number of successful extensions: 810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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