Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0076.Seq
(662 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.49
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 25 0.85
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 2.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.5
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 4.5
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 22 4.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.4 bits (53), Expect = 0.49
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Frame = +3
Query: 141 RFWQSFVRSL----KGSEDIRAEERYRPTRRSVFPELLSTY-PTPSRFTTTLSLPLR--- 296
R W+ + +L + SE + A+ +R ++P S+ P P S PL
Sbjct: 44 RRWKQYQDTLYSGTRSSESLTAQAHHR-----LYPAFSSSCDPVPGNLEQIGSRPLHPPA 98
Query: 297 -GLRYPATVTCLSIARSTATPRALSMPTTT 383
PAT+T + +T T A + TTT
Sbjct: 99 SSTSLPATITTTTTTTTTTTATAAATATTT 128
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 24.6 bits (51), Expect = 0.85
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 11 PRHHTTLFNYDRYLTEYEHDID 76
PRH + L N + +T++E D+D
Sbjct: 175 PRHASDLDNCNHLMTKFEPDLD 196
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 362 PSGYIRSAFGTPISTGRP 379
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 362 PSGYIRSAFGTPISTGRP 379
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 362 PSGYIRSAFGTPISTGRP 379
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 362 PSGYIRSAFGTPISTGRP 379
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 362 PSGYIRSAFGTPISTGRP 379
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 362 PSGYIRSAFGTPISTGRP 379
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 430 PSGYIRSAFGTPISTGRP 447
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 541 PLGRVRSEMGTPVDGSQP 488
P G +RS GTP+ +P
Sbjct: 430 PSGYIRSAFGTPISTGRP 447
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 158 RAFSKRFGRHQSRGKVQANTPQRFSRTPVDLPYSKSIYDD 277
+AF+++ + S GK+ A P FS P + Y++
Sbjct: 337 KAFARKKTDYSSFGKILATEPTLFSNVTPKFPRNIDEYNN 376
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SLRRPQGMAGPSRQAGCHRPVYPSRYGLYLKD 543
++R G+A P R+ G P++ +Y + D
Sbjct: 297 TMRFRNGLAFPQRETGATVPLHMQKYVQMIHD 328
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 465 RHGRTISTGWLPSTGVPISLRTLPKGPGLPHHRAYRTPH 581
R R G+ + +P +RT+ K P + RT H
Sbjct: 15 RREREAEHGYASTMPMPDDMRTVTKRPKTKKSQGSRTTH 53
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 223 LRRVGLYLSSALMSSEPFRERT 158
L++VG + + E FRERT
Sbjct: 67 LKKVGFVNADTTFNEEKFRERT 88
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SLRRPQGMAGPSRQAGCHRPVYPSRYGLYLKD 543
++R G+A P R+ G P++ +Y + D
Sbjct: 297 TMRFRNGLAFPQRETGATVPLHMQKYVQMIHD 328
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -2
Query: 439 TSHASWHVVDWPVIIERARVVVGIDRARGVAVDLAMD 329
T+ W ++D + +R +D R V VD+ M+
Sbjct: 1088 TNEEMWELIDTEKLTDRLPYPWTMDNERYVKVDMYMN 1124
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -1
Query: 521 RDGYTGRWQPACRDGPAMPCGRRRDQL-----HVARVLARG 414
++G G WQ GP +P D+L + RV+A G
Sbjct: 946 KEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEG 986
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -1
Query: 521 RDGYTGRWQPACRDGPAMPCGRRRDQL-----HVARVLARG 414
++G G WQ GP +P D+L + RV+A G
Sbjct: 942 KEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEG 982
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,425
Number of Sequences: 438
Number of extensions: 4558
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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