Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0074.Seq
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    22   4.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.9  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 633 LCQAYLNFGSNW 598
           LC A LNF  NW
Sbjct: 16  LCAAQLNFTPNW 27


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 507 PHPVPHLPLFIDLSHKKSIQYRTTNFVPPS 596
           P P P LP +  +  K+++   T   +PP+
Sbjct: 188 PQPQPVLPTYKWMQVKRNVPKPTVPKIPPA 217


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 657 GVTCGGKTTLANKLKNALTPV 719
           G TCGG ++    LK+A  PV
Sbjct: 21  GSTCGGSSSSMAYLKSAPYPV 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 507 PHPVPHLPLFIDLSHKKSIQYRTTNFVPPS 596
           P P P LP +  +  K+++   T   +PP+
Sbjct: 188 PQPQPVLPTYKWMQVKRNVPKPTVPKIPPA 217


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 261 GQLIIISCVVRFFTSTFVW 205
           G +III C+++F T  F +
Sbjct: 535 GFIIIIGCLIQFNTIVFAF 553


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,582
Number of Sequences: 336
Number of extensions: 3791
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)