Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0074.Seq
         (735 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060471-1|AAL25510.1|  323|Drosophila melanogaster SD05789p pro...    43   4e-04
AE014296-638|AAN11559.1|  323|Drosophila melanogaster CG12016-PB...    43   4e-04
AE014296-637|AAF47759.2|  323|Drosophila melanogaster CG12016-PA...    43   4e-04
BT022821-1|AAY55237.1|  545|Drosophila melanogaster IP13241p pro...    32   0.93 
BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p pro...    32   0.93 
AE014296-1022|AAF50737.1|  564|Drosophila melanogaster CG18586-P...    32   0.93 
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    32   0.93 
AE014297-2335|AAN13740.1|  148|Drosophila melanogaster CG31257-P...    29   8.7  

>AY060471-1|AAL25510.1|  323|Drosophila melanogaster SD05789p
           protein.
          Length = 323

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +3

Query: 636 WVIIGISGVTCGGKTTLANKL 698
           W++IGISGVTCGGKTTLA+ L
Sbjct: 4   WLVIGISGVTCGGKTTLAHSL 24


>AE014296-638|AAN11559.1|  323|Drosophila melanogaster CG12016-PB,
           isoform B protein.
          Length = 323

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +3

Query: 636 WVIIGISGVTCGGKTTLANKL 698
           W++IGISGVTCGGKTTLA+ L
Sbjct: 4   WLVIGISGVTCGGKTTLAHSL 24


>AE014296-637|AAF47759.2|  323|Drosophila melanogaster CG12016-PA,
           isoform A protein.
          Length = 323

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +3

Query: 636 WVIIGISGVTCGGKTTLANKL 698
           W++IGISGVTCGGKTTLA+ L
Sbjct: 4   WLVIGISGVTCGGKTTLAHSL 24


>BT022821-1|AAY55237.1|  545|Drosophila melanogaster IP13241p
           protein.
          Length = 545

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 722 VDWC*GIL*LIGEGRFSATSDPGNADYDP-IFARHI 618
           +DWC G+   I  G FS TS   + D+DP +F R I
Sbjct: 241 LDWCSGLSMAITSGVFSTTSIIADCDFDPGLFCRAI 276


>BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p protein.
          Length = 1104

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +3

Query: 258  DQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 437
            + N+ K+  + EPA  P  + K   +AKK+KPL +    K    K  + P E++S +D  
Sbjct: 846  ESNLGKVPTVKEPAKLPEPLIKT--KAKKEKPLKKEKGAKLLTPKDEVLPIERESAKDET 903

Query: 438  K 440
            K
Sbjct: 904  K 904


>AE014296-1022|AAF50737.1|  564|Drosophila melanogaster CG18586-PA
           protein.
          Length = 564

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 722 VDWC*GIL*LIGEGRFSATSDPGNADYDP-IFARHI 618
           +DWC G+   I  G FS TS   + D+DP +F R I
Sbjct: 260 LDWCSGLSMAITSGVFSTTSIIADCDFDPGLFCRAI 295


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +3

Query: 258  DQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 437
            + N+ K+  + EPA  P  + K   +AKK+KPL +    K    K  + P E++S +D  
Sbjct: 5088 ESNLGKVPTVKEPAKLPEPLIKT--KAKKEKPLKKEKGAKLLTPKDEVLPIERESAKDET 5145

Query: 438  K 440
            K
Sbjct: 5146 K 5146


>AE014297-2335|AAN13740.1|  148|Drosophila melanogaster CG31257-PA
           protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
 Frame = -3

Query: 376 FTSVFSSKGF-C---FLALCIIFSTILGSAAGSERTSNFFIFWSTYYH*LCCSFFHFYFC 209
           F   F  +GF C   F A+C +      S AGSE      I    Y +  CC+  H Y  
Sbjct: 20  FLPPFVLRGFECPLLFCAVCHLSYLNCVSGAGSEARKKRLI---KYVNCACCTMGHKYLH 76

Query: 208 MDEELLDLQTSNVSYHAFLVCCVL 137
             + L ++  +N     FL  C++
Sbjct: 77  RRQFLHEIVANNAEKLIFLAFCIV 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,965,987
Number of Sequences: 53049
Number of extensions: 624780
Number of successful extensions: 1710
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)