Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0074.Seq
(735 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33520.3 68417.m04762 metal-transporting P-type ATPase, putat... 32 0.34
At4g33520.2 68417.m04761 metal-transporting P-type ATPase, putat... 32 0.34
At4g33520.1 68417.m04760 metal-transporting P-type ATPase, putat... 32 0.34
At3g59110.1 68416.m06590 protein kinase family protein contains ... 29 2.4
At3g27440.1 68416.m03430 uracil phosphoribosyltransferase, putat... 29 2.4
At1g09060.2 68414.m01011 transcription factor jumonji (jmjC) dom... 29 2.4
At1g09060.1 68414.m01010 transcription factor jumonji (jmjC) dom... 29 2.4
At3g52310.1 68416.m05749 ABC transporter family protein contains... 29 3.2
At2g42960.1 68415.m05328 protein kinase family protein contains ... 29 3.2
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 29 3.2
At1g56720.2 68414.m06524 protein kinase family protein contains ... 29 3.2
At1g56720.1 68414.m06523 protein kinase family protein contains ... 29 3.2
At1g25682.1 68414.m03178 cell cycle control protein-related cont... 29 3.2
At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family... 29 3.2
At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family... 29 3.2
At2g01460.1 68415.m00069 phosphoribulokinase/uridine kinase fami... 29 4.2
At3g11964.1 68416.m01479 S1 RNA-binding domain-containing protei... 28 5.6
At5g04720.1 68418.m00482 disease resistance protein (CC-NBS-LRR ... 28 7.4
At5g03190.1 68418.m00267 expressed protein 28 7.4
At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR... 28 7.4
At3g32910.1 68416.m04167 hypothetical protein similar to At2g152... 28 7.4
At1g50280.1 68414.m05637 phototropic-responsive NPH3 family prot... 28 7.4
At1g20670.1 68414.m02589 DNA-binding bromodomain-containing prot... 28 7.4
At1g09440.1 68414.m01056 protein kinase family protein contains ... 28 7.4
At5g46490.2 68418.m05725 disease resistance protein (TIR-NBS cla... 27 9.8
At5g46490.1 68418.m05724 disease resistance protein (TIR-NBS cla... 27 9.8
At5g46260.1 68418.m05695 disease resistance protein (TIR-NBS-LRR... 27 9.8
At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR... 27 9.8
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 27 9.8
At2g42760.1 68415.m05295 expressed protein 27 9.8
At2g29820.1 68415.m03622 kelch repeat-containing F-box family pr... 27 9.8
At2g21440.1 68415.m02551 RNA recognition motif (RRM)-containing ... 27 9.8
At1g30240.1 68414.m03699 PELP1-related contains weak similarity ... 27 9.8
>At4g33520.3 68417.m04762 metal-transporting P-type ATPase, putative
(PAA1) nearly identical to gi:2668492; contains Pfam
heavy-metal-associated domain PF00403
Length = 949
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 597 ANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKL 698
AN S ++P D +I+ + G+TCGG + K+
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKI 169
>At4g33520.2 68417.m04761 metal-transporting P-type ATPase, putative
(PAA1) nearly identical to gi:2668492; contains Pfam
heavy-metal-associated domain PF00403
Length = 949
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 597 ANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKL 698
AN S ++P D +I+ + G+TCGG + K+
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKI 169
>At4g33520.1 68417.m04760 metal-transporting P-type ATPase, putative
(PAA1) nearly identical to gi:2668492; contains Pfam
heavy-metal-associated domain PF00403
Length = 237
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 597 ANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKL 698
AN S ++P D +I+ + G+TCGG + K+
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKI 169
>At3g59110.1 68416.m06590 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 512
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 524 FTLIYRSEPQKINSVSYNKLCSTISQFEPKFKYAWQRLGHNRH 652
+ ++Y+ N V+ KL + + Q E +F+ + +GH RH
Sbjct: 201 YGVVYKGRLINGNDVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 243
>At3g27440.1 68416.m03430 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 465
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 603 LSQNSNMPGKDWVIIGISGVTCGGKTTLANKLKNAL 710
+S ++ P K +IG++G T GKTT+ N + + L
Sbjct: 18 VSPSAPAPLKQPFVIGVAGGTASGKTTVCNMIMSQL 53
>At1g09060.2 68414.m01011 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 318 EKIIQRAKKQKPLLENTEVKKGKEKSILFPEEK 416
E +R +K KP+ E + K + +S+L PE+K
Sbjct: 667 ETTFERVRKTKPVPEEPDQKMSENESLLSPEQK 699
>At1g09060.1 68414.m01010 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 318 EKIIQRAKKQKPLLENTEVKKGKEKSILFPEEK 416
E +R +K KP+ E + K + +S+L PE+K
Sbjct: 667 ETTFERVRKTKPVPEEPDQKMSENESLLSPEQK 699
>At3g52310.1 68416.m05749 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 737
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 534 FIDLSHKKSIQYRTTNFVPPSANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKL 698
FID+++K + + T++ N S PG+ ++G SG GKTTL N L
Sbjct: 147 FIDITYKVTTKGMTSSSEKSILNGISGSAYPGELLALMGPSG---SGKTTLLNAL 198
>At2g42960.1 68415.m05328 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 494
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 524 FTLIYRSEPQKINSVSYNKLCSTISQFEPKFKYAWQRLGHNRH 652
+ ++YR + V+ KL + + Q E +F+ + +GH RH
Sbjct: 194 YGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRH 236
>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
protein / PEP carboxylase family protein similar to
SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 1032
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 522 HLPLFIDLSHKKSIQYR--TTNFVPPSANLSQNSNMPGKDWVII---GISGVTCGGKTTL 686
HLP ID + ++ TT+++PP+ + DW I SG+T G +
Sbjct: 352 HLPACIDFGESRHTKFEIATTDYMPPNLQKQNEQDFSESDWEKIDNGSRSGLTSRGSFSS 411
Query: 687 ANKL 698
++L
Sbjct: 412 TSQL 415
>At1g56720.2 68414.m06524 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 492
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 524 FTLIYRSEPQKINSVSYNKLCSTISQFEPKFKYAWQRLGHNRH 652
+ ++YR E V+ K+ + + Q E +F+ +GH RH
Sbjct: 190 YGVVYRGELMNGTPVAVKKILNQLGQAEKEFRVEVDAIGHVRH 232
>At1g56720.1 68414.m06523 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 492
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 524 FTLIYRSEPQKINSVSYNKLCSTISQFEPKFKYAWQRLGHNRH 652
+ ++YR E V+ K+ + + Q E +F+ +GH RH
Sbjct: 190 YGVVYRGELMNGTPVAVKKILNQLGQAEKEFRVEVDAIGHVRH 232
>At1g25682.1 68414.m03178 cell cycle control protein-related
contains similarity to Swiss-Prot:Q9P7C5 cell cycle
control protein cwf16 [Schizosaccharomyces pombe]
Length = 310
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 491 WTFLMSSPCTTFTLIYRSEPQKINSVSYNKLCSTISQFE 607
W+F M SPC ++ +++PQ V + + ++E
Sbjct: 87 WSFAMKSPCCKHEIVIQTDPQNCEYVITSGAQKKVEEYE 125
>At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 288 SEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 437
SE + VEK ++ ++ Q+ +++N + G + + L E+KQ D E
Sbjct: 186 SEKPRSDSKVEKKLEESETQEEIVKNHKCNSGSKDNSLISEQKQEENDKE 235
>At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 288 SEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 437
SE + VEK ++ ++ Q+ +++N + G + + L E+KQ D E
Sbjct: 186 SEKPRSDSKVEKKLEESETQEEIVKNHKCNSGSKDNSLISEQKQEENDKE 235
>At2g01460.1 68415.m00069 phosphoribulokinase/uridine kinase family
protein contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 723
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 639 VIIGISGVTCGGKTTLANKLKN 704
VI+GI G + GKT+LA+K+ N
Sbjct: 521 VIVGIGGPSGSGKTSLAHKMAN 542
>At3g11964.1 68416.m01479 S1 RNA-binding domain-containing protein
similar to SP|Q05022 rRNA biogenesis protein RRP5
{Saccharomyces cerevisiae}; contains Pfam profile
PF00575: S1 RNA binding domain
Length = 1838
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 232 SFFHFYFCMDEELLDLQTSNVS 167
SF YF MDE++ DLQ+S+++
Sbjct: 748 SFVQEYFLMDEKISDLQSSDIT 769
>At5g04720.1 68418.m00482 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 811
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 642 IIGISGVTCGGKTTLANKL 698
+IGISG++ GKTTLA +L
Sbjct: 202 LIGISGMSGSGKTTLAKEL 220
>At5g03190.1 68418.m00267 expressed protein
Length = 451
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 507 PHPVPHLPLFIDLSHKKSIQY 569
P V +LP F+DLS KKS+ Y
Sbjct: 272 PKSVAYLPKFLDLSLKKSLVY 292
>At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1607
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 642 IIGISGVTCGGKTTLANKLKNALTPVY 722
+IGI G+ GKTT+A +L L P +
Sbjct: 291 LIGICGLPGSGKTTIAKRLYQQLLPQF 317
>At3g32910.1 68416.m04167 hypothetical protein similar to At2g15200,
At2g04970, At1g32830, At2g14140, At4g03990
Length = 377
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 327 IQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQD 431
++R KK+K +++ + KGK+K ++ +++ SF D
Sbjct: 121 VKRKKKEKWWIKDNQTLKGKQKKDVWIDKEMSFID 155
>At1g50280.1 68414.m05637 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 525
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 170 NVRGLQVKQFLIH---TKVEVKKRTTQLMIIS*PEYKKVASS 286
N++ L + +FL+H TK++ K RTT ++ + EY +A +
Sbjct: 227 NIKSLVLTRFLLHYLKTKLQTKSRTTTELMRNKLEYSDLADT 268
>At1g20670.1 68414.m02589 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 652
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 336 AKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKEL 446
A++Q+P + N +++ LFP KQ F F +L
Sbjct: 586 ARQQQPNVSNEATPVSQQQGSLFPYPKQEFHRFPPDL 622
>At1g09440.1 68414.m01056 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 466
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 524 FTLIYRSEPQKINSVSYNKLCSTISQFEPKFKYAWQRLGHNRH 652
+ ++YR E + V+ K+ + + Q E +F+ +GH RH
Sbjct: 168 YGVVYRGELVNGSLVAVKKILNHLGQAEKEFRVEVDAIGHVRH 210
>At5g46490.2 68418.m05725 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 858
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 597 ANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKLKNAL 710
AN+S ++ K+ ++GI G + GKTT+A L N L
Sbjct: 190 ANMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNL 227
>At5g46490.1 68418.m05724 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 597 ANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKLKNAL 710
AN+S ++ K+ ++GI G + GKTT+A L N L
Sbjct: 190 ANMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNL 227
>At5g46260.1 68418.m05695 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1205
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 597 ANLSQNSNMPGKDWVIIGISGVTCGGKTTLANKLKNAL 710
AN+S ++ K+ ++GI G + GKTT+A L N L
Sbjct: 190 ANMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNL 227
>At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.; closest
homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
Length = 1449
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 618 LNFGSNWLMVEQSLLYDTELIFCGSD 541
+NFG N ++S L D EL FC +D
Sbjct: 1288 VNFGFNGKQYQKSFLEDEELEFCKTD 1313
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 267 IKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKG 383
+K L + + DPN +E + QRA K L+ N E+K+G
Sbjct: 1090 LKILECTNHLSTDPNCLENL-QRADAIKQLIPNLELKEG 1127
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 318 EKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQD 431
EK QR KK+K N +KGK S L EE + F D
Sbjct: 125 EKEEQRKKKKKK--SNVRTRKGKSMSDLEYEELKGFMD 160
>At2g29820.1 68415.m03622 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 388
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 682 VVFPPQVTPEMPIMTQSLPGIFEFWLKLADGGTKFVV 572
VV+ P + P+M LP + + W K+A+ G K V+
Sbjct: 298 VVYYPNESVWRPVMGFHLPILSQCWSKIANFGGKLVI 334
>At2g21440.1 68415.m02551 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 1003
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 294 PAADPNIVEKIIQRAKKQKPLLENTEV----KKGKEKSILFPEEKQSFQDFEKELF 449
P + +K ++ KP+ +++ V K GK K ++ P+E Q DFE+ LF
Sbjct: 510 PEGETEESDKSKLKSSSTKPVADSSGVSEPLKSGKTK-VVAPKETQDNDDFERTLF 564
>At1g30240.1 68414.m03699 PELP1-related contains weak similarity to
PELP1 [Homo sapiens] gi|21426922|gb|AAC17708
Length = 873
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 612 NSNMPGKDWVIIGISGVTC 668
+S+MP K WV I + GVTC
Sbjct: 86 SSDMPDKSWVGICLIGVTC 104
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,224,993
Number of Sequences: 28952
Number of extensions: 308299
Number of successful extensions: 943
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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