Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0070.Seq
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   3.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   6.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.1  

>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 284 ILDFLSVLPVCPRVGPASAVRNLWSL 207
           I + LSVLPV   +  +  V N+W L
Sbjct: 245 IFERLSVLPVDKLLQISEEVANIWGL 270


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 65  LCLRRRNPASMFSKLTSSPKKHRS 136
           +C R RN + +      SP+ +RS
Sbjct: 403 VCFRPRNNSILIKNFNDSPESNRS 426


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 14  KKEEPCCVLCLFSPWSQ 64
           KK  P  VLC  + WSQ
Sbjct: 517 KKVRPPQVLCYITSWSQ 533


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 284 ILDFLSVLPVCPRVGPASAVRNLWSL 207
           I + LS+LPV   +  +  V N+W L
Sbjct: 247 IFERLSILPVDEFLQISEEVANIWGL 272


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 103 GKHRCRVSATQTQLRPRREQTQ 38
           GK++ R     T++RP+R+ ++
Sbjct: 240 GKNQQRTGTELTKMRPKRQSSR 261


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 317 VPIPRTRRSRCICLRIPDSRI 379
           V + R++ S  +CL IP+S +
Sbjct: 109 VLVHRSQNSNDVCLAIPESLV 129


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 339 RLVRGIGTHRILLQRSPQYSRFPFRSSS 256
           R V     + ILL+   ++  FPFR ++
Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPFRKTT 216


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 479 PRRFPPGRQLPKVELKPV 532
           P +F P  +LPK + KP+
Sbjct: 208 PHKFQPLLRLPKFKKKPL 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,127
Number of Sequences: 336
Number of extensions: 3888
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)