Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0070.Seq
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    24   1.3  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   7.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.5  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 694 VITTWKGFVGLLVIILRKSFEGVLRIGLLCSSGSSFLPCFFMSYTSSPHIW-SLFYWFQL 518
           V+T    ++ +L+ ILR S +G  R    CSS  +     F+SY +   I+      F L
Sbjct: 90  VLTILISYIYILMAILRMSADGGCRNFSTCSSHPT---AAFISYGTLFFIYVQPSATFSL 146

Query: 517 DLRKLSS 497
           DL K+ S
Sbjct: 147 DLNKVVS 153


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 363 IRRHMHLDRLVRGIG 319
           + RH H+ RLV  IG
Sbjct: 107 VERHKHIVRLVTAIG 121


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/38 (21%), Positives = 17/38 (44%)
 Frame = +3

Query: 291 DYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENRVR 404
           DY  E     +Y+G   +  + Y Y+   + +  N ++
Sbjct: 247 DYGNEAISKREYNGIGAVIEFKYSYEISNAFRGNNNLK 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,968
Number of Sequences: 438
Number of extensions: 4425
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)