Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0069.Seq
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.29 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 333 YFLFTIYFLYVLYIRICIHIIVLNLITDF 247
           +FL  IY+ Y  +I   +H++ L  I  F
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 24.6 bits (51), Expect = 0.88
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 334 IFPIHYIFFICIVYTY 287
           IF +H +F +CI Y Y
Sbjct: 274 IFTMHLLFLLCIYYFY 289



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 334 IFPIHYIFFICIVYTYMYTH 275
           +F +H +  +CI Y Y Y H
Sbjct: 247 LFTVHLLLLVCIYYFY-YMH 265



 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 327 LFTIYFLYVLYIRICIHIIVLNLITDF 247
           L  IY+ Y  +I   +H+++L  I  F
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYF 261



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 333 YFLFTIYFLYVLYIRICIH 277
           + L T YF Y   I +C++
Sbjct: 96  FLLCTYYFYYAFIILLCVY 114



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 327 LFTIYFLYVLYIRICIHIIVLNLITDFRQP 238
           L  +Y+ Y  +I   +H++ L  I  F  P
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVP 139



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 372 IQMRLLHNPSNRRYFLFTIYFLYVLYIRICIHIIVL 265
           +Q+ +L +   + Y L  IY+ Y + I   +H++ L
Sbjct: 38  LQVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFL 73



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 356 CITHPIADISYSLYIFYMYC 297
           CI + +  + + L I+Y YC
Sbjct: 132 CIYYFVVPLFFLLCIYYFYC 151



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 333 YFLFTIYFLYVLYIRICIHII 271
           YF+  ++FL  +Y   C  II
Sbjct: 135 YFVVPLFFLLCIYYFYCAFII 155



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 331 FPIHYIFFICIVYTY 287
           F +H +F  CI Y Y
Sbjct: 202 FTLHLLFLPCIYYFY 216


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 77  ESVNIKMDWVLTSLY 33
           ESV IKMDW+ +  Y
Sbjct: 349 ESVQIKMDWIKSKGY 363


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 251 IFVSHFRNYKKVKVEYVDFPEQITLMLQI*FIFFR 147
           + VS  RN KKV    ++    + + L   F+F++
Sbjct: 468 VCVSQLRNAKKVDEAILEERPDVKIFLPFRFLFYK 502


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 336 RYFLFTIYFLYVLYIRICIHI 274
           +YF+  IY L +L   + +H+
Sbjct: 42  KYFIIAIYVLTILTSSVTLHV 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 120  TSRLKVYMCSGRRLRVRKHKNGLGFNK 40
            T+  + Y+C+  +L+++   NGL +NK
Sbjct: 2247 TNCAQYYLCNQGQLQLQVCPNGLFWNK 2273



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = -3

Query: 180  IDASNLIYFFSSSWASFGTQ-TSRLKVYMCSG 88
            +D  NLI     SWA F  Q   R+  Y   G
Sbjct: 1437 LDFENLIVKAHDSWADFDNQFYKRVTGYKAKG 1468


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 177 DASNLIYFFSSSWASFGTQTSR 112
           +  + IY F  SW   G  TSR
Sbjct: 98  NTKSFIYHFLHSWLGTGLLTSR 119


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 366 MRLLHNPSNRRYFLFTIYFLYVLYIRICI 280
           +R + N   R YF ++  FL V  + +C+
Sbjct: 310 LRQMKNNLERIYFYWSFGFLIVRTVCLCL 338


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 366 MRLLHNPSNRRYFLFTIYFLYVLYIRICI 280
           +R + N   R YF ++  FL V  + +C+
Sbjct: 310 LRQMKNNLERIYFYWSFGFLIVRTVCLCL 338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,940
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)