Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0066.Seq
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3JW84 Cluster: Sensor protein; n=2; Rhodobacterales ba...    36   1.5  
UniRef50_Q7RM15 Cluster: Putative uncharacterized protein PY0237...    34   4.4  
UniRef50_UPI00006CC2DC Cluster: hypothetical protein TTHERM_0066...    33   5.9  
UniRef50_A6PF65 Cluster: Putative uncharacterized protein precur...    33   7.8  

>UniRef50_A3JW84 Cluster: Sensor protein; n=2; Rhodobacterales
           bacterium HTCC2150|Rep: Sensor protein - Rhodobacterales
           bacterium HTCC2150
          Length = 1521

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
 Frame = +3

Query: 204 NGCIDIVIAKTF*YLAGKIFYVTQKQNRNAVMNHVFLRSLSFIVKTLHHNYLVRISRSY- 380
           NG I+++IA     L  K F  T    + A +  +   +L+FIV      +LV I  S  
Sbjct: 138 NGLINVLIASLLLILGRKYFLKTPWIQKGASVWSISALALTFIV------FLVFIPSSIT 191

Query: 381 IHVP*HFCFSEINMSIHYFTKLFENKFK*GYQKNKSHVYEYKTNKILSKFQTLSSFLTKP 560
           +H   +F   + N  I+Y +K+ ENK      + +  +++    +I +K   L   +TK 
Sbjct: 192 LH---YFSEKDFNQKINYLSKMTENKAILARAEFEHLLWDKTREQIFTKNLLLEKDVTKY 248

Query: 561 NKAKL 575
            K K+
Sbjct: 249 TKLKI 253


>UniRef50_Q7RM15 Cluster: Putative uncharacterized protein PY02373;
            n=9; cellular organisms|Rep: Putative uncharacterized
            protein PY02373 - Plasmodium yoelii yoelii
          Length = 2240

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +3

Query: 270  TQKQNRNAVMNHVFLRSLSFIVKTLHHNYLVRISRSYIHVP*HFCFSEINMSIHYFTKLF 449
            ++K N+ A+++   +     IV+++ ++ ++ I+ + IH+    CF+ IN  +  + K  
Sbjct: 1174 SKKNNKVAIVSENLVHKEKHIVESIENDIVINIT-NLIHIY-TICFNYINNDLSNYHKKK 1231

Query: 450  ENKFK*GYQKNKSHVYEYKTNKIL--SKFQTL 539
             +  K    K+  HV EY   K +   K QT+
Sbjct: 1232 NDAIKKKINKDIKHVIEYDFFKFIVNEKCQTI 1263


>UniRef50_UPI00006CC2DC Cluster: hypothetical protein
           TTHERM_00663880; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00663880 - Tetrahymena
           thermophila SB210
          Length = 1489

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +2

Query: 530 SNTIKFSNKAQ*GEII---LI*ERNAYIAFKNSYSIKYTNALLNKMTVTKLGNFTRLWR* 700
           +NT K+ + +  G++     +   N YIAF N  +I + N+++N+ +   L   +  +  
Sbjct: 340 NNTGKYQDPSSSGQLFQYTTVQANNIYIAFNNLQNIFFFNSIINQQSQVDLSQESSTFIF 399

Query: 701 SNVPFITNY 727
           + V FI NY
Sbjct: 400 TQVQFIQNY 408


>UniRef50_A6PF65 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella sediminis HAW-EB3|Rep:
           Putative uncharacterized protein precursor - Shewanella
           sediminis HAW-EB3
          Length = 242

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 30  IIYLDTKPYLFYPSFNPITGIYAIVKQLC 116
           ++YL  K  LFY S+N +TGI   +  LC
Sbjct: 138 LVYLSMKGRLFYSSWNAVTGILTFISFLC 166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,372,441
Number of Sequences: 1657284
Number of extensions: 13175121
Number of successful extensions: 26195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26189
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)