Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0066.Seq
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0674 + 26619579-26619658,26620020-26620746,26620999-266214...    28   7.1  
02_04_0658 - 24793219-24794109                                         28   7.1  

>03_05_0674 +
           26619579-26619658,26620020-26620746,26620999-26621486,
           26621746-26621902,26621975-26621998
          Length = 491

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 321 RIVKKRDSLLHFDSAFESHKIFYPLNTKT 235
           +I  K D+L + D    S  I+YPLN KT
Sbjct: 256 QIRSKFDTLQYLDVTLHSTMIYYPLNKKT 284


>02_04_0658 - 24793219-24794109
          Length = 296

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 717 IKGTLLYLHKRVKFPSFVTVILLSKAFVYFIEYEFLNAI*AFLSYIKIISPYWALLENLI 538
           IK   L LH    F     +++++    Y + + F   + A L +I I+ PYW +     
Sbjct: 222 IKKFSLRLHLLFSF----ALMIMTLGVTYQLHHMFFILLLALLVFISIVCPYWLIRIQEY 277

Query: 537 VFEI 526
            FEI
Sbjct: 278 KFEI 281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,400,247
Number of Sequences: 37544
Number of extensions: 294896
Number of successful extensions: 406
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)