Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0065.Seq
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 129 1e-29
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 129 1e-29
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 129 1e-29
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 129 1e-29
BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein. 129 1e-29
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 129 1e-29
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 54 6e-07
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 54 6e-07
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 54 6e-07
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 54 6e-07
AL096771-1|CAM28080.1| 637|Homo sapiens collagen type XII alpha... 32 2.1
BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif dom... 30 8.3
BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif dom... 30 8.3
BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif dom... 30 8.3
BC110605-1|AAI10606.1| 318|Homo sapiens EPN3 protein protein. 30 8.3
BC077722-1|AAH77722.1| 208|Homo sapiens EPN3 protein protein. 30 8.3
BC051365-1|AAH51365.1| 208|Homo sapiens EPN3 protein protein. 30 8.3
BC001038-1|AAH01038.1| 208|Homo sapiens EPN3 protein protein. 30 8.3
AK000785-1|BAA91378.1| 632|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein. 30 8.3
AF324241-1|AAG45223.1| 632|Homo sapiens epsin 3 protein. 30 8.3
AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein. 30 8.3
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 129 bits (312), Expect = 1e-29
Identities = 64/92 (69%), Positives = 68/92 (73%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFY
Sbjct: 352 QMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFY 411
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 412 AFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 443
Score = 104 bits (249), Expect = 4e-22
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLK 408
+++ G+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L++
Sbjct: 258 KKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIE 317
Query: 409 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNI-VWRC--YTR 579
K+ + + ED DK+GK LLK VMR WLPAG+ALL+ I HL P +RC
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQ---MITIHLPSPVTAQKYRCELLYE 374
Query: 580 DPTMMKLPLVSRAVILKPH**CT*ARWCRPPTKVVSTPFGRVFLWQGCYRTKARIMGPNF 759
P + + ++ K ++ K FGRVF K RIMGPN+
Sbjct: 375 GPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNY 434
Query: 760 TLERK 774
T +K
Sbjct: 435 TPGKK 439
Score = 103 bits (248), Expect = 6e-22
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYND-DGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYAD 211
YQTFQRIVENVNVII+TY + + GPMG + +DP G+VGFGSGLHGWAFTLKQF+EMY
Sbjct: 175 YQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVA 234
Query: 212 KF 217
KF
Sbjct: 235 KF 236
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 129 bits (312), Expect = 1e-29
Identities = 64/92 (69%), Positives = 68/92 (73%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFY
Sbjct: 352 QMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFY 411
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 412 AFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 443
Score = 104 bits (249), Expect = 4e-22
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLK 408
+++ G+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L++
Sbjct: 258 KKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIE 317
Query: 409 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNI-VWRC--YTR 579
K+ + + ED DK+GK LLK VMR WLPAG+ALL+ I HL P +RC
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQ---MITIHLPSPVTAQKYRCELLYE 374
Query: 580 DPTMMKLPLVSRAVILKPH**CT*ARWCRPPTKVVSTPFGRVFLWQGCYRTKARIMGPNF 759
P + + ++ K ++ K FGRVF K RIMGPN+
Sbjct: 375 GPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNY 434
Query: 760 TLERK 774
T +K
Sbjct: 435 TPGKK 439
Score = 103 bits (248), Expect = 6e-22
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYND-DGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYAD 211
YQTFQRIVENVNVII+TY + + GPMG + +DP G+VGFGSGLHGWAFTLKQF+EMY
Sbjct: 175 YQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVA 234
Query: 212 KF 217
KF
Sbjct: 235 KF 236
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 129 bits (312), Expect = 1e-29
Identities = 64/92 (69%), Positives = 68/92 (73%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFY
Sbjct: 352 QMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFY 411
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 412 AFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 443
Score = 104 bits (249), Expect = 4e-22
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLK 408
+++ G+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L++
Sbjct: 258 KKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIE 317
Query: 409 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNI-VWRC--YTR 579
K+ + + ED DK+GK LLK VMR WLPAG+ALL+ I HL P +RC
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQ---MITIHLPSPVTAQKYRCELLYE 374
Query: 580 DPTMMKLPLVSRAVILKPH**CT*ARWCRPPTKVVSTPFGRVFLWQGCYRTKARIMGPNF 759
P + + ++ K ++ K FGRVF K RIMGPN+
Sbjct: 375 GPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNY 434
Query: 760 TLERK 774
T +K
Sbjct: 435 TPGKK 439
Score = 103 bits (248), Expect = 6e-22
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYND-DGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYAD 211
YQTFQRIVENVNVII+TY + + GPMG + +DP G+VGFGSGLHGWAFTLKQF+EMY
Sbjct: 175 YQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVA 234
Query: 212 KF 217
KF
Sbjct: 235 KF 236
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 129 bits (312), Expect = 1e-29
Identities = 64/92 (69%), Positives = 68/92 (73%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFY
Sbjct: 11 QMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFY 70
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 71 AFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 102
>BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein.
Length = 583
Score = 129 bits (312), Expect = 1e-29
Identities = 64/92 (69%), Positives = 68/92 (73%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFY
Sbjct: 352 QMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFY 411
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 412 AFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 443
Score = 104 bits (249), Expect = 4e-22
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLK 408
+++ G+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L++
Sbjct: 258 KKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIE 317
Query: 409 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNI-VWRC--YTR 579
K+ + + ED DK+GK LLK VMR WLPAG+ALL+ I HL P +RC
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQ---MITIHLPSPVTAQKYRCELLYE 374
Query: 580 DPTMMKLPLVSRAVILKPH**CT*ARWCRPPTKVVSTPFGRVFLWQGCYRTKARIMGPNF 759
P + + ++ K ++ K FGRVF K RIMGPN+
Sbjct: 375 GPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNY 434
Query: 760 TLERK 774
T +K
Sbjct: 435 TPGKK 439
Score = 103 bits (248), Expect = 6e-22
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYND-DGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYAD 211
YQTFQRIVENVNVII+TY + + GPMG + +DP G+VGFGSGLHGWAFTLKQF+EMY
Sbjct: 175 YQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVA 234
Query: 212 KF 217
KF
Sbjct: 235 KF 236
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 129 bits (312), Expect = 1e-29
Identities = 64/92 (69%), Positives = 68/92 (73%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMI IHLPSPV AQKYR E+LYEGP DDEAA+GIKSCDP+ PLMMY+SKMVPTSDKGRFY
Sbjct: 352 QMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFY 411
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLY 785
AF FS K G GKKEDLY
Sbjct: 412 AFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLY 443
Score = 104 bits (249), Expect = 4e-22
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLK 408
+++ G+ +F+P K+SK R+FC +LDPI+KVFDAIM FKKEE L++
Sbjct: 258 KKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIE 317
Query: 409 KIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNI-VWRC--YTR 579
K+ + + ED DK+GK LLK VMR WLPAG+ALL+ I HL P +RC
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQ---MITIHLPSPVTAQKYRCELLYE 374
Query: 580 DPTMMKLPLVSRAVILKPH**CT*ARWCRPPTKVVSTPFGRVFLWQGCYRTKARIMGPNF 759
P + + ++ K ++ K FGRVF K RIMGPN+
Sbjct: 375 GPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNY 434
Query: 760 TLERK 774
T +K
Sbjct: 435 TPGKK 439
Score = 103 bits (248), Expect = 6e-22
Identities = 46/62 (74%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYND-DGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYAD 211
YQTFQRIVENVNVII+TY + + GPMG + +DP G+VGFGSGLHGWAFTLKQF+EMY
Sbjct: 175 YQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVA 234
Query: 212 KF 217
KF
Sbjct: 235 KF 236
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 54.0 bits (124), Expect = 6e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 513 MIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 692
M H+PSP V K ++E Y G D + + CDP+ PLM + +KM T D +F+A
Sbjct: 438 MCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHA 497
Query: 693 F 695
F
Sbjct: 498 F 498
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/83 (24%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIG 417
+++ G+ +FNP+T+K++K+ ++RSF ++L+P+YK+ ++ + L ++G
Sbjct: 346 KRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELG 405
Query: 418 VTIKHEDSDKDGKALLKVVMRSW 486
+ + E+ + + LL++V + +
Sbjct: 406 IHLTKEELKLNIRPLLRLVCKKF 428
Score = 43.6 bits (98), Expect = 8e-04
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
Y + IV+ VN +I+ Y+ D + + P G+V F S + FTL F+++YAD
Sbjct: 280 YYKLRHIVDEVNGLISMYSTDENLI----LSPLLGNVCFSSSQYSICFTLGSFAKIYADT 335
Query: 215 F-KIDLVKLMNRLWEKTFSTLKRRSGQNK 298
F I+ + RLW + K R K
Sbjct: 336 FGDINYQEFAKRLWGDIYFNPKTRKFTKK 364
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 54.0 bits (124), Expect = 6e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 513 MIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 692
M H+PSP V K ++E Y G D + + CDP+ PLM + +KM T D +F+A
Sbjct: 433 MCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHA 492
Query: 693 F 695
F
Sbjct: 493 F 493
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/83 (24%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIG 417
+++ G+ +FNP+T+K++K+ ++RSF ++L+P+YK+ ++ + L ++G
Sbjct: 341 KRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELG 400
Query: 418 VTIKHEDSDKDGKALLKVVMRSW 486
+ + E+ + + LL++V + +
Sbjct: 401 IHLTKEELKLNIRPLLRLVCKKF 423
Score = 43.6 bits (98), Expect = 8e-04
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
Y + IV+ VN +I+ Y+ D + + P G+V F S + FTL F+++YAD
Sbjct: 275 YYKLRHIVDEVNGLISMYSTDENLI----LSPLLGNVCFSSSQYSICFTLVSFAKIYADT 330
Query: 215 F-KIDLVKLMNRLWEKTFSTLKRRSGQNK 298
F I+ + RLW + K R K
Sbjct: 331 FGDINYQEFAKRLWGDIYFNPKTRKFTKK 359
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 54.0 bits (124), Expect = 6e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 513 MIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 692
M H+PSP V K ++E Y G D + + CDP+ PLM + +KM T D +F+A
Sbjct: 433 MCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHA 492
Query: 693 F 695
F
Sbjct: 493 F 493
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/83 (24%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIG 417
+++ G+ +FNP+T+K++K+ ++RSF ++L+P+YK+ ++ + L ++G
Sbjct: 341 KRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELG 400
Query: 418 VTIKHEDSDKDGKALLKVVMRSW 486
+ + E+ + + LL++V + +
Sbjct: 401 IHLTKEELKLNIRPLLRLVCKKF 423
Score = 43.6 bits (98), Expect = 8e-04
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
Y + IV+ VN +I+ Y+ D + + P G+V F S + FTL F+++YAD
Sbjct: 275 YYKLRHIVDEVNGLISMYSTDENLI----LSPLLGNVCFSSSQYSICFTLVSFAKIYADT 330
Query: 215 F-KIDLVKLMNRLWEKTFSTLKRRSGQNK 298
F I+ + RLW + K R K
Sbjct: 331 FGDINYQEFAKRLWGDIYFNPKTRKFTKK 359
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 54.0 bits (124), Expect = 6e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 513 MIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 692
M H+PSP V K ++E Y G D + + CDP+ PLM + +KM T D +F+A
Sbjct: 311 MCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHA 370
Query: 693 F 695
F
Sbjct: 371 F 371
Score = 47.2 bits (107), Expect = 7e-05
Identities = 20/83 (24%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKD-DDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIG 417
+++ G+ +FNP+T+K++K+ ++RSF ++L+P+YK+ ++ + L ++G
Sbjct: 219 KRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELG 278
Query: 418 VTIKHEDSDKDGKALLKVVMRSW 486
+ + E+ + + LL++V + +
Sbjct: 279 IHLTKEELKLNIRPLLRLVCKKF 301
Score = 43.6 bits (98), Expect = 8e-04
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
Y + IV+ VN +I+ Y+ D + + P G+V F S + FTL F+++YAD
Sbjct: 153 YYKLRHIVDEVNGLISMYSTDENLI----LSPLLGNVCFSSSQYSICFTLGSFAKIYADT 208
Query: 215 F-KIDLVKLMNRLWEKTFSTLKRRSGQNK 298
F I+ + RLW + K R K
Sbjct: 209 FGDINYQEFAKRLWGDIYFNPKTRKFTKK 237
>AL096771-1|CAM28080.1| 637|Homo sapiens collagen type XII alpha 1
protein.
Length = 637
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 159 PDPKPTEPLLGSTRTSPMGPPSSLYVAIMTLTFSTIRWN 43
PD ++ L+GS RT P P +L V T T++W+
Sbjct: 470 PDESESDDLIGSERTPPKSGPRNLQVYNATSNSLTVKWD 508
>BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 182 LKQFSEMYADKFKIDLVKLMNRLWE--KTFSTLKRRSGQNKRMMTTNVHF 325
+ QFSE D F+I + N++WE K FS R +K + V F
Sbjct: 310 IPQFSECQYDYFQIKMQNYNNKIWEQSKKFSLFVRDGTSSKDITKNKVDF 359
>BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 182 LKQFSEMYADKFKIDLVKLMNRLWE--KTFSTLKRRSGQNKRMMTTNVHF 325
+ QFSE D F+I + N++WE K FS R +K + V F
Sbjct: 310 IPQFSECQYDYFQIKMQNYNNKIWEQSKKFSLFVRDGTSSKDITKNKVDF 359
>BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 182 LKQFSEMYADKFKIDLVKLMNRLWE--KTFSTLKRRSGQNKRMMTTNVHF 325
+ QFSE D F+I + N++WE K FS R +K + V F
Sbjct: 310 IPQFSECQYDYFQIKMQNYNNKIWEQSKKFSLFVRDGTSSKDITKNKVDF 359
>BC110605-1|AAI10606.1| 318|Homo sapiens EPN3 protein protein.
Length = 318
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTI 52
+T P GPPSSL I LTF+T+
Sbjct: 27 ATSNDPWGPPSSLMSEIADLTFNTV 51
>BC077722-1|AAH77722.1| 208|Homo sapiens EPN3 protein protein.
Length = 208
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTI 52
+T P GPPSSL I LTF+T+
Sbjct: 27 ATSNDPWGPPSSLMSEIADLTFNTV 51
>BC051365-1|AAH51365.1| 208|Homo sapiens EPN3 protein protein.
Length = 208
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTI 52
+T P GPPSSL I LTF+T+
Sbjct: 27 ATSNDPWGPPSSLMSEIADLTFNTV 51
>BC001038-1|AAH01038.1| 208|Homo sapiens EPN3 protein protein.
Length = 208
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTI 52
+T P GPPSSL I LTF+T+
Sbjct: 27 ATSNDPWGPPSSLMSEIADLTFNTV 51
>AK000785-1|BAA91378.1| 632|Homo sapiens protein ( Homo sapiens
cDNA FLJ20778 fis, clone COL05704. ).
Length = 632
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTI 52
+T P GPPSSL I LTF+T+
Sbjct: 27 ATSNDPWGPPSSLMSEIADLTFNTV 51
>AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.
Length = 1589
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 182 LKQFSEMYADKFKIDLVKLMNRLWE--KTFSTLKRRSGQNKRMMTTNVHF 325
+ QFSE D F+I + N++WE K FS R +K + V F
Sbjct: 310 IPQFSECQYDYFQIKMQNYNNKIWEQSKKFSLFVRDGTSSKDITKNKVDF 359
>AF324241-1|AAG45223.1| 632|Homo sapiens epsin 3 protein.
Length = 632
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 126 STRTSPMGPPSSLYVAIMTLTFSTI 52
+T P GPPSSL I LTF+T+
Sbjct: 27 ATSNDPWGPPSSLMSEIADLTFNTV 51
>AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.
Length = 1595
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 182 LKQFSEMYADKFKIDLVKLMNRLWE--KTFSTLKRRSGQNKRMMTTNVHF 325
+ QFSE D F+I + N++WE K FS R +K + V F
Sbjct: 316 IPQFSECQYDYFQIKMQNYNNKIWEQSKKFSLFVRDGTSSKDITKNKVDF 365
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,051,318
Number of Sequences: 237096
Number of extensions: 3052480
Number of successful extensions: 11745
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11730
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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