Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0065.Seq
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 139 2e-33
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 139 2e-33
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 46 2e-05
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 46 2e-05
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical p... 29 5.0
U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical pr... 29 5.0
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 29 5.0
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 139 bits (336), Expect = 2e-33
Identities = 66/93 (70%), Positives = 70/93 (75%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMIA HLPSPV AQKYRMEMLYEGPHDDEAA+ IK+CDP PLMMY+SKMVPTSDKGRFY
Sbjct: 346 QMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFY 405
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLYE 788
AF FS K+ G GKKEDLYE
Sbjct: 406 AFGRVFSGKVATGMKARIQGPNYVPGKKEDLYE 438
Score = 129 bits (311), Expect = 3e-30
Identities = 58/83 (69%), Positives = 66/83 (79%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
+QTFQRIVEN+NVIIATY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA K
Sbjct: 187 FQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGK 246
Query: 215 FKIDLVKLMNRLWEKTFSTLKRR 283
F + + KLM LW F LK +
Sbjct: 247 FGVQVDKLMKNLWGDRFFDLKTK 269
Score = 109 bits (262), Expect = 2e-24
Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 420
+ + G+ FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K+G+
Sbjct: 256 KNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGI 315
Query: 421 TIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNIVWRCYTRDPTMMKL 600
+ +++ D +GK L+KV MR WLPAG+ +L+ + F HL P + + Y +
Sbjct: 316 KLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAF---HL--PSPVTAQKYRMEMLYEGP 370
Query: 601 PLVSRAVILK---PH**CT*ARWCRPPT--KVVSTPFGRVFLWQGCYRTKARIMGPNFTL 765
AV +K P+ PT K FGRVF + KARI GPN+
Sbjct: 371 HDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVP 430
Query: 766 ERK 774
+K
Sbjct: 431 GKK 433
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 139 bits (336), Expect = 2e-33
Identities = 66/93 (70%), Positives = 70/93 (75%)
Frame = +3
Query: 510 QMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFY 689
QMIA HLPSPV AQKYRMEMLYEGPHDDEAA+ IK+CDP PLMMY+SKMVPTSDKGRFY
Sbjct: 346 QMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFY 405
Query: 690 AFWTRFSLARLLPDKSSHHGTKLYTGKKEDLYE 788
AF FS K+ G GKKEDLYE
Sbjct: 406 AFGRVFSGKVATGMKARIQGPNYVPGKKEDLYE 438
Score = 129 bits (311), Expect = 3e-30
Identities = 58/83 (69%), Positives = 66/83 (79%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 214
+QTFQRIVEN+NVIIATY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA K
Sbjct: 187 FQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGK 246
Query: 215 FKIDLVKLMNRLWEKTFSTLKRR 283
F + + KLM LW F LK +
Sbjct: 247 FGVQVDKLMKNLWGDRFFDLKTK 269
Score = 109 bits (262), Expect = 2e-24
Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Frame = +1
Query: 241 EQVMGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 420
+ + G+ FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K+G+
Sbjct: 256 KNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGI 315
Query: 421 TIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL*WPRNIVWRCYTRDPTMMKL 600
+ +++ D +GK L+KV MR WLPAG+ +L+ + F HL P + + Y +
Sbjct: 316 KLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAF---HL--PSPVTAQKYRMEMLYEGP 370
Query: 601 PLVSRAVILK---PH**CT*ARWCRPPT--KVVSTPFGRVFLWQGCYRTKARIMGPNFTL 765
AV +K P+ PT K FGRVF + KARI GPN+
Sbjct: 371 HDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVP 430
Query: 766 ERK 774
+K
Sbjct: 431 GKK 433
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 513 MIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 692
++ ++ SP+ K ++E Y GP D + A ++ C+ E PLM++ +K P D +F+
Sbjct: 437 LVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGPLMVHTTKNYPVDDATQFHV 496
Query: 693 F 695
F
Sbjct: 497 F 497
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/80 (21%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 244 QVMGENFFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 420
++ G+ +F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+
Sbjct: 346 RLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGI 405
Query: 421 TIKHEDSDKDGKALLKVVMR 480
+ E+ + + L+ ++ +
Sbjct: 406 RLSKEEQKMNVRPLIALICK 425
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 513 MIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYA 692
++ ++ SP+ K ++E Y GP D + A ++ C+ E PLM++ +K P D +F+
Sbjct: 312 LVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGPLMVHTTKNYPVDDATQFHV 371
Query: 693 F 695
F
Sbjct: 372 F 372
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/80 (21%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 244 QVMGENFFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 420
++ G+ +F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+
Sbjct: 221 RLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGI 280
Query: 421 TIKHEDSDKDGKALLKVVMR 480
+ E+ + + L+ ++ +
Sbjct: 281 RLSKEEQKMNVRPLIALICK 300
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATY-------NDDGGPMGE----VRVDPSKGSVGFGSGLHGWAFT 181
YQ R++E VN I+ +D G + E + DP+KG+V F S LH +AF
Sbjct: 160 YQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSYAFG 219
Query: 182 LKQFSEMYADKFKIDLVKLM 241
+ F+++ A+K K++ L+
Sbjct: 220 CEDFAQIAAEKMKVEKSALL 239
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Frame = +2
Query: 35 YQTFQRIVENVNVIIATY-------NDDGGPMGE----VRVDPSKGSVGFGSGLHGWAFT 181
YQ R++E VN I+ +D G + E + DP+KG+V F S LH +AF
Sbjct: 160 YQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSYAFG 219
Query: 182 LKQFSEMYADKFKIDLVKLM 241
+ F+++ A+K K++ L+
Sbjct: 220 CEDFAQIAAEKMKVEKSALL 239
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 528 NEWQSSEQSFTSRQPRAHHNLQQSFAIFVR 439
NEWQ S+ + ++R P + N+ + AIFVR
Sbjct: 471 NEWQKSQLTISNRPPAPYDNVPNNSAIFVR 500
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 504 SFTSRQPRAHHNLQQSFAIFVRILMLDCDSNLLKEIINLLFLKF 373
SF + A HN + + + + L DC + L K++ ++F F
Sbjct: 62 SFCDKHRAATHNQKINITVLIEALCPDCQNFLTKQLYPIVFKNF 105
>Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical
protein W02B12.7 protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/63 (22%), Positives = 34/63 (53%)
Frame = +1
Query: 361 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL 540
DAI++ +E+ DL +I V I+ D ++DG + ++ ++ + + + + + H+
Sbjct: 129 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHV 188
Query: 541 *WP 549
+P
Sbjct: 189 FFP 191
>U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical
protein C03B8.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 355 VFDAIMKFKKEEIDDLLKKIGVTIKHED 438
+FDA+ K ++ +D K + VTI HED
Sbjct: 69 LFDALRKITADQYNDHKKVVEVTIDHED 96
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/63 (22%), Positives = 34/63 (53%)
Frame = +1
Query: 361 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLR*LPFIYHHL 540
DAI++ +E+ DL +I V I+ D ++DG + ++ ++ + + + + + H+
Sbjct: 263 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHV 322
Query: 541 *WP 549
+P
Sbjct: 323 FFP 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,902,061
Number of Sequences: 27780
Number of extensions: 453832
Number of successful extensions: 1560
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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