Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0064.Seq
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase... 147 2e-35
AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA ... 146 4e-35
AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens ... 102 1e-21
U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase hom... 54 4e-07
BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial acetola... 54 4e-07
BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial acetola... 54 4e-07
AC004794-3|AAC18916.1| 393|Homo sapiens Acetolactate synthase p... 54 4e-07
AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase p... 54 4e-07
BC110508-1|AAI10509.1| 1248|Homo sapiens DKFZP586P0123 protein p... 31 4.5
AK125894-1|BAC86334.1| 1224|Homo sapiens rp86). protein. 31 4.5
AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein pr... 31 4.5
>BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase 1
protein.
Length = 578
Score = 147 bits (357), Expect = 2e-35
Identities = 81/197 (41%), Positives = 113/197 (57%)
Frame = +3
Query: 3 RMNWMLHFGQPPRYAPDVKIIQVEISPARISQQQEIRISSTLRH*TFYRSSCKKVVRKEV 182
R+NW+LHFG PPRY PDVK IQV+I + + ++ L + + + K
Sbjct: 282 RLNWILHFGLPPRYQPDVKFIQVDICAEELGNNVKPAVT-LLGNIHAVTKQLLEELDKTP 340
Query: 183 LIATSKQQLVAGTETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGAN 362
+ + + KS + AS ++P+NYYTVF VQ+ +P+D +VSEGAN
Sbjct: 341 WQYPPESKWWKTLREKMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGAN 400
Query: 363 TMDIGRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVFVLKETLLLAS 542
TMDIGR +L N PRHRLDAGTFGTMGVG GFAIAAA+ +D +PG+ + ++
Sbjct: 401 TMDIGRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVE-----GD 455
Query: 543 QAWX*RHVPVQVTCNYN 593
A+ + V+ C YN
Sbjct: 456 SAFGFSGMEVETICRYN 472
Score = 36.7 bits (81), Expect = 0.068
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +1
Query: 46 RPTLKLFRSKYLLQEFHNSKKSELAVHSDIRPFTEALVKRLSERKFSLQPQNNSWWQGLK 225
+P +K + +E N+ K + + +I T+ L++ L + + P++ WW+ L+
Sbjct: 296 QPDVKFIQVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTPWQYPPESK-WWKTLR 354
Query: 226 QKQKAN 243
+K K+N
Sbjct: 355 EKMKSN 360
>AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA
lyase protein.
Length = 578
Score = 146 bits (355), Expect = 4e-35
Identities = 81/197 (41%), Positives = 112/197 (56%)
Frame = +3
Query: 3 RMNWMLHFGQPPRYAPDVKIIQVEISPARISQQQEIRISSTLRH*TFYRSSCKKVVRKEV 182
R+NW+LHFG PPRY PDVK IQV+I + + ++ L + + + K
Sbjct: 282 RLNWILHFGLPPRYQPDVKFIQVDICAEELGNNVKPAVT-LLGNIHAVTKQLLEELDKTP 340
Query: 183 LIATSKQQLVAGTETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGAN 362
+ + + KS + AS ++P+NYYTVF VQ+ +P+D +VSEGAN
Sbjct: 341 WQYPPESKWWKTLREKMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGAN 400
Query: 363 TMDIGRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVFVLKETLLLAS 542
TMDIGR +L N PRHRLDAGTFGTMGVG GFAIAAA+ +D +PG + ++
Sbjct: 401 TMDIGRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGHWIICVE-----GD 455
Query: 543 QAWX*RHVPVQVTCNYN 593
A+ + V+ C YN
Sbjct: 456 SAFGFSGMEVETICRYN 472
Score = 36.7 bits (81), Expect = 0.068
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +1
Query: 46 RPTLKLFRSKYLLQEFHNSKKSELAVHSDIRPFTEALVKRLSERKFSLQPQNNSWWQGLK 225
+P +K + +E N+ K + + +I T+ L++ L + + P++ WW+ L+
Sbjct: 296 QPDVKFIQVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTPWQYPPESK-WWKTLR 354
Query: 226 QKQKAN 243
+K K+N
Sbjct: 355 EKMKSN 360
>AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ43251 fis, clone HEART2006131, weakly similar
to Mus musculus 2-hydroxyphytanoyl-CoA lyase
(Hpcl-pending). ).
Length = 569
Score = 102 bits (244), Expect = 1e-21
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Frame = +3
Query: 3 RMNWMLHFGQPPRYAPDVKIIQVEISPARISQQQEIRISSTLRH*TFYRSSCKKVVRKEV 182
R+NW+LH+G PR++ V+ IQ++I+P + ++ + L S + + +
Sbjct: 277 RLNWILHYGHSPRWSNKVRFIQIDIAPEELGNNRQDTLP-LLGDIQLVVSQITQALTGK- 334
Query: 183 LIATSKQQLVAGTETETKS---KHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSII-VS 350
++ V+G + K K + ++ S +A+ LNY T F ++ +P++ I+ VS
Sbjct: 335 -LSNINPDYVSGLVNKVKQNVEKTKTAGSKGSDSAI-LNYSTAFTVIKSLLPENDIVYVS 392
Query: 351 EGANTMDIGRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRV 509
EGANTMDIGR + PRHRLDAGT TMGVG G+AI A + Y KRV
Sbjct: 393 EGANTMDIGRSYFDVHEPRHRLDAGTGATMGVGMGYAIGAQSY---YGDAKRV 442
>U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase
homolog protein.
Length = 632
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +3
Query: 222 ETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 401
E + + + E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCR 485
P LD G FGT+GVG GFA+ A + CR
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR 510
>BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +3
Query: 222 ETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 401
E + + + E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCR 485
P LD G FGT+GVG GFA+ A + CR
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR 510
>BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial
acetolactate synthase)-like protein.
Length = 632
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +3
Query: 222 ETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 401
E + + + E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCR 485
P LD G FGT+GVG GFA+ A + CR
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR 510
>AC004794-3|AAC18916.1| 393|Homo sapiens Acetolactate synthase
protein.
Length = 393
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +3
Query: 222 ETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 401
E + + + E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 185 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 244
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCR 485
P LD G FGT+GVG GFA+ A + CR
Sbjct: 245 PLRWLDPGAFGTLGVGAGFALGAKL-CR 271
>AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase
protein.
Length = 632
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +3
Query: 222 ETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDIGRGLLLNNH 401
E + + + E A A LN V + V++ +P +SI+V +G + + L+
Sbjct: 424 EADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRG 483
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCR 485
P LD G FGT+GVG GFA+ A + CR
Sbjct: 484 PLRWLDPGAFGTLGVGAGFALGAKL-CR 510
>BC110508-1|AAI10509.1| 1248|Homo sapiens DKFZP586P0123 protein
protein.
Length = 1248
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKR-VFVLKETLLLA 539
P RL F G+ PG + +WCR Y P R V K TL L+
Sbjct: 373 PVQRLLLSAFSAQGLVPGGGVQFEIWCRYYYPNVRDQKVAKGTLPLS 419
>AK125894-1|BAC86334.1| 1224|Homo sapiens rp86). protein.
Length = 1224
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKR-VFVLKETLLLA 539
P RL F G+ PG + +WCR Y P R V K TL L+
Sbjct: 349 PVQRLLLSAFSAQGLVPGGGVQFEIWCRYYYPNVRDQKVAKGTLPLS 395
>AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein
protein.
Length = 1963
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 402 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKR-VFVLKETLLLA 539
P RL F G+ PG + +WCR Y P R V K TL L+
Sbjct: 1088 PVQRLLLSAFSAQGLVPGGGVQFEIWCRYYYPNVRDQKVAKGTLPLS 1134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,888,512
Number of Sequences: 237096
Number of extensions: 2022372
Number of successful extensions: 8812
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8805
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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