Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0064.Seq
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058683-1|AAL13912.1|  568|Drosophila melanogaster LD40177p pro...   166   2e-41
AE013599-2972|AAF57501.1|  568|Drosophila melanogaster CG11208-P...   166   2e-41

>AY058683-1|AAL13912.1|  568|Drosophila melanogaster LD40177p
           protein.
          Length = 568

 Score =  166 bits (403), Expect = 2e-41
 Identities = 84/175 (48%), Positives = 113/175 (64%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   RMNWMLHFGQPPRYAPDVKIIQVEISPARI--SQQQEIRISSTLRH*TFYRSSCKKVVRK 176
           R+NW+LHFG+ PRY  DVK IQV+I+P  +  S    + I + +R   F     +++   
Sbjct: 272 RLNWILHFGKAPRYDKDVKFIQVDINPEELHNSVVASVAIQADIR--PFAEQLFEQMNAV 329

Query: 177 EVLIATSKQQLVAGTETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEG 356
                  +Q        + K      +  + +T  PLNYY VF  +++ +PKD+IIVSEG
Sbjct: 330 NFRFGY-EQDWWKQLAVKCKQNRDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEG 388

Query: 357 ANTMDIGRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVFVLK 521
           ANTMDIGR +LLN  PRHRLDAGTFGTMGVGPGFA+AAA++CRD+APGKRV  ++
Sbjct: 389 ANTMDIGRSMLLNEQPRHRLDAGTFGTMGVGPGFAVAAALFCRDFAPGKRVLCVE 443



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)
 Frame = +1

Query: 85  QEFHNSKKSELAVHSDIRPFTEALVKRLSERKFSLQPQNNSWWQGLKQKQKANTEFVR 258
           +E HNS  + +A+ +DIRPF E L ++++   F    + + WW+ L  K K N + V+
Sbjct: 299 EELHNSVVASVAIQADIRPFAEQLFEQMNAVNFRFGYEQD-WWKQLAVKCKQNRDTVQ 355



 Score = 36.3 bits (80), Expect = 0.034
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 509 ICVEGDSAFGFSGMVXET 562
           +CVEGDSAFGFSGM  ET
Sbjct: 440 LCVEGDSAFGFSGMEIET 457


>AE013599-2972|AAF57501.1|  568|Drosophila melanogaster CG11208-PA
           protein.
          Length = 568

 Score =  166 bits (403), Expect = 2e-41
 Identities = 84/175 (48%), Positives = 113/175 (64%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   RMNWMLHFGQPPRYAPDVKIIQVEISPARI--SQQQEIRISSTLRH*TFYRSSCKKVVRK 176
           R+NW+LHFG+ PRY  DVK IQV+I+P  +  S    + I + +R   F     +++   
Sbjct: 272 RLNWILHFGKAPRYDKDVKFIQVDINPEELHNSVVASVAIQADIR--PFAEQLFEQMNAV 329

Query: 177 EVLIATSKQQLVAGTETETKSKHRICEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEG 356
                  +Q        + K      +  + +T  PLNYY VF  +++ +PKD+IIVSEG
Sbjct: 330 NFRFGY-EQDWWKQLAVKCKQNRDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEG 388

Query: 357 ANTMDIGRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVFVLK 521
           ANTMDIGR +LLN  PRHRLDAGTFGTMGVGPGFA+AAA++CRD+APGKRV  ++
Sbjct: 389 ANTMDIGRSMLLNEQPRHRLDAGTFGTMGVGPGFAVAAALFCRDFAPGKRVLCVE 443



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)
 Frame = +1

Query: 85  QEFHNSKKSELAVHSDIRPFTEALVKRLSERKFSLQPQNNSWWQGLKQKQKANTEFVR 258
           +E HNS  + +A+ +DIRPF E L ++++   F    + + WW+ L  K K N + V+
Sbjct: 299 EELHNSVVASVAIQADIRPFAEQLFEQMNAVNFRFGYEQD-WWKQLAVKCKQNRDTVQ 355



 Score = 36.3 bits (80), Expect = 0.034
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 509 ICVEGDSAFGFSGMVXET 562
           +CVEGDSAFGFSGM  ET
Sbjct: 440 LCVEGDSAFGFSGMEIET 457


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,005,902
Number of Sequences: 53049
Number of extensions: 622197
Number of successful extensions: 1945
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)