Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0062.Seq
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M55533-1|AAA28305.1|  564|Drosophila melanogaster 5HT-dro seroto...    29   6.6  
BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p pro...    29   6.6  
AY118491-1|AAM49860.1|  564|Drosophila melanogaster LD04507p pro...    29   6.6  
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase...    29   6.6  
AE014297-4690|AAF57104.1|  564|Drosophila melanogaster CG12073-P...    29   6.6  
AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA...    29   6.6  

>M55533-1|AAA28305.1|  564|Drosophila melanogaster 5HT-dro serotonin
           receptor protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 111 IFVWRTVLINFVSLIYYFEL**HFKKNDEEIVYFTCSS 224
           +F+W     + ++ I Y  L   F+K  +EI+YF CSS
Sbjct: 491 LFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSS 528


>BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p
           protein.
          Length = 1221

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 139 FIRTVRQTKIPSTTYNNKKKITL 71
           FI T++Q KIP   +NN K +TL
Sbjct: 158 FIATLKQNKIPINDFNNAKILTL 180


>AY118491-1|AAM49860.1|  564|Drosophila melanogaster LD04507p
           protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 111 IFVWRTVLINFVSLIYYFEL**HFKKNDEEIVYFTCSS 224
           +F+W     + ++ I Y  L   F+K  +EI+YF CSS
Sbjct: 491 LFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSS 528


>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
           protein.
          Length = 1924

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 139 FIRTVRQTKIPSTTYNNKKKITL 71
           FI T++Q KIP   +NN K +TL
Sbjct: 860 FIATLKQNKIPINDFNNAKILTL 882


>AE014297-4690|AAF57104.1|  564|Drosophila melanogaster CG12073-PA
           protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 111 IFVWRTVLINFVSLIYYFEL**HFKKNDEEIVYFTCSS 224
           +F+W     + ++ I Y  L   F+K  +EI+YF CSS
Sbjct: 491 LFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSS 528


>AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA
           protein.
          Length = 1929

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 139 FIRTVRQTKIPSTTYNNKKKITL 71
           FI T++Q KIP   +NN K +TL
Sbjct: 866 FIATLKQNKIPINDFNNAKILTL 888


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,860,520
Number of Sequences: 53049
Number of extensions: 483120
Number of successful extensions: 863
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)