BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0058.Seq (660 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 40 3e-05 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.4 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.5 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.5 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.5 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.5 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.0 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 39.5 bits (88), Expect = 3e-05 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = +1 Query: 310 NITWQLP---VGGEDAERAEFPFMALLLFGASAEEAQWLFGGSVLSARYILTAAHCI 471 N W+ P VGG + EFP MA + E + G +++S RY+LTAAHCI Sbjct: 152 NCGWKNPSRIVGGTNTGINEFPMMAGI---KRTYEPGMICGATIISKRYVLTAAHCI 205 Score = 29.1 bits (62), Expect = 0.039 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Frame = +3 Query: 552 HTLAQVIPHPDYASPSK----YHDIALLKTEQTIIFNVNV 659 H++ +VI HP Y K +DIALLKTE+ I F V Sbjct: 234 HSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 22.6 bits (46), Expect = 3.4 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -1 Query: 135 STSSQSVQHTMCSLPRSPHTGGKDLSL*SRMSVSQRLLSTH 13 S+S+ S ++CS PRS +D+ + R+ + L T+ Sbjct: 594 SSSASSAPTSVCSSPRSEDKEVEDMPVLKRVLQAPPLYDTN 634 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 22.2 bits (45), Expect = 4.5 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = +2 Query: 71 PPVCGLRGKEHIVCCTDC 124 PP G IV CT+C Sbjct: 413 PPTGATTGPNEIVTCTNC 430 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 22.2 bits (45), Expect = 4.5 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = +2 Query: 71 PPVCGLRGKEHIVCCTDC 124 PP G IV CT+C Sbjct: 399 PPTGATTGPNEIVTCTNC 416 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 22.2 bits (45), Expect = 4.5 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = +2 Query: 71 PPVCGLRGKEHIVCCTDC 124 PP G IV CT+C Sbjct: 433 PPTGATTGPNEIVTCTNC 450 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 22.2 bits (45), Expect = 4.5 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = +2 Query: 71 PPVCGLRGKEHIVCCTDC 124 PP G IV CT+C Sbjct: 382 PPTGATTGPNEIVTCTNC 399 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 21.8 bits (44), Expect = 6.0 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +3 Query: 570 IPHPDYASPSKYHDIALLKTE 632 I D ++ KY D+ +LKT+ Sbjct: 593 IEFTDLSNERKYEDVCVLKTD 613 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 169,935 Number of Sequences: 438 Number of extensions: 3606 Number of successful extensions: 12 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 19855845 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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