Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0055.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    26   0.99 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    26   0.99 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   3.0  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   9.2  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 120 KHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLC 233
           K+ +      + + C VC +    P    C H FC  C
Sbjct: 233 KYEIHSDDEELPFKCYVCRESFVDPIVTKCKHYFCERC 270


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 120 KHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLC 233
           K+ +      + + C VC +    P    C H FC  C
Sbjct: 233 KYEIHSDDEELPFKCYVCRESFVDPIVTKCKHYFCERC 270


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 191 SNKTILRS-CFLFSLCEGCSSSSRKCAMCRTEI 286
           S++ + +S CF    C  C  + + CA C  E+
Sbjct: 24  SSRVVTQSKCFFQKNCIECLDADKDCAWCTDEL 56


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 204  SCGHVFCFLCVKGVAHQAE 260
            SCG +FC  C    AH  E
Sbjct: 1829 SCGQIFCAECSDYTAHLPE 1847


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 204  SCGHVFCFLCVKGVAHQAE 260
            SCG +FC  C    AH  E
Sbjct: 1830 SCGQIFCAECSDYTAHLPE 1848


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 558 FAPAAASMITSTELSHCWKSTMYKVPASSKVHSDSPLL 445
           F     +  TST+LS+C   T+     S++  S  P++
Sbjct: 411 FQRVGTTRSTSTKLSNCSMRTIRTTVRSTRAPSPGPIV 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,516
Number of Sequences: 2352
Number of extensions: 15367
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)