Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0054.Seq
         (807 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LF92 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  
UniRef50_Q5BXI6 Cluster: SJCHGC07664 protein; n=1; Schistosoma j...    33   8.5  

>UniRef50_Q6LF92 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1340

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
 Frame = +3

Query: 75  DKLVHQS-ILCHTTNRDIYRRHRVVPSALYLTLQGLPSRKFS**FMYVTV--CLHGHH 239
           D+++++  IL  + N++IY + +++P  LYL +Q          + Y+++  C+HG H
Sbjct: 505 DQIINKKLILIKSKNKEIYEKEKLLPETLYL-IQSKDITSSQEKYFYISIKKCIHGIH 561


>UniRef50_Q5BXI6 Cluster: SJCHGC07664 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07664 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 161

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 52  QHNAIKPTIN*CTNQFSVTQQIGIFTEDIASSRLLYI*PFKGFLHENSHNNLCMLLFVYT 231
           Q +A+K T++   +Q  V +Q+G F  D+ S     +  +   LH    NN  +   +Y 
Sbjct: 78  QRSALKVTVSAVDSQSPVREQVGFFMLDLRSCSTEKVYKWYRLLHSKYKNNPAVFASIYL 137

Query: 232 DTTWLGQRL 258
           D    GQ L
Sbjct: 138 DAD--GQEL 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,812,560
Number of Sequences: 1657284
Number of extensions: 13611302
Number of successful extensions: 24562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24562
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)