Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0054.Seq
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025050-1|ABE73221.1|  624|Drosophila melanogaster IP16114p pro...    30   3.2  
AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB...    30   3.2  
AY051416-1|AAK92840.1|  302|Drosophila melanogaster GH09390p pro...    29   9.9  
AE013599-3916|AAF47239.1|  302|Drosophila melanogaster CG3570-PA...    29   9.9  

>BT025050-1|ABE73221.1|  624|Drosophila melanogaster IP16114p
           protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 479 LWAPVNTLHHWDVSSCTHLSNKKTKYDVTLIN 574
           LW  +N   H+  S C HL + K   DVTL N
Sbjct: 167 LWLALNEREHFVASVCQHLKDFKCFQDVTLRN 198


>AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB,
           isoform B protein.
          Length = 2243

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 479 LWAPVNTLHHWDVSSCTHLSNKKTKYDVTLIN 574
           LW  +N   H+  S C HL + K   DVTL N
Sbjct: 167 LWLALNEREHFVASVCQHLKDFKCFQDVTLRN 198


>AY051416-1|AAK92840.1|  302|Drosophila melanogaster GH09390p
           protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 440 RDRGRWRHIRCRCLWAPVNTLHHWDVSSCTHLSNKKTKYDVTLIN 574
           R  G+   ++CR +  P + LH  DV SC +  +     +VT ++
Sbjct: 106 RAEGKLGEVQCRLMEEPPDRLHVLDVGSCFNPFSSAPHLEVTALD 150


>AE013599-3916|AAF47239.1|  302|Drosophila melanogaster CG3570-PA
           protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 440 RDRGRWRHIRCRCLWAPVNTLHHWDVSSCTHLSNKKTKYDVTLIN 574
           R  G+   ++CR +  P + LH  DV SC +  +     +VT ++
Sbjct: 106 RAEGKLGEVQCRLMEEPPDRLHVLDVGSCFNPFSSAPHLEVTALD 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,277,798
Number of Sequences: 53049
Number of extensions: 617776
Number of successful extensions: 1353
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)