Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0050.Seq
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   3.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   3.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   3.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   6.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.1  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 261 SKDFHPNRTQNFASYNNN 314
           +K   PN+ +NF  Y+NN
Sbjct: 135 AKKTPPNQYENFQQYDNN 152


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 261 SKDFHPNRTQNFASYNNN 314
           +K   PN+ +NF  Y+NN
Sbjct: 135 AKKTPPNQYENFQQYDNN 152


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 261 SKDFHPNRTQNFASYNNN 314
           +K   PN+ +NF  Y+NN
Sbjct: 135 AKKTPPNQYENFQQYDNN 152


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 545 LLWINFIVIYRGGKGL 498
           LLW+ F++I  G  G+
Sbjct: 30  LLWVLFVIIVAGNVGV 45


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = -2

Query: 493 TFWQLYRRAKLKFGKNIIRKNFFSYFNALNLIEVQLKTLNL*C*YQINRTSNYKEKCRVL 314
           TF+ +  R  L F K  + K+FF+    L+  E+     N                  VL
Sbjct: 71  TFFNVSLRIILVFSKGKVIKSFFNQGYELSKQEI----FNCCSKKSFRMNFAIFNLYMVL 126

Query: 313 LLLYEAKFWV 284
           LLL++A  W+
Sbjct: 127 LLLFDAYLWI 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,388
Number of Sequences: 336
Number of extensions: 3645
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)