Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0046.Seq
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   6.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.1  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 446 RAKSLAPLDTIYSYSYGEPIPTV 514
           RA+     +  ++Y YG+PIP +
Sbjct: 230 RARRKEIAEIAFAYKYGDPIPYI 252


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 506 PTVSAMTLTLLSFWCPYAASRIASTIFPSITSQP 607
           PT S+ ++       P  AS  +   FP  TSQP
Sbjct: 94  PTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQP 127


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 409 SVGANSTGLIFESLGCFGAQEVIDG 335
           S G N  G I  SLG  G++ V  G
Sbjct: 213 SFGTNLVGGIVRSLGTLGSRVVESG 237


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 372 LSKMRPVEFAPTLRL*STGLALW 440
           LS++R +E A  LRL    + +W
Sbjct: 142 LSRLRRIEIATCLRLSEKQVKIW 164


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 291 WTESLTDAAQHWPYLPSMTSCAPK 362
           W+E++TD  +H  +L  +    P+
Sbjct: 2   WSENITDVLKHVWFLSKLFLLCPR 25


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 186 IYRPTSRSVTRLVTYPDVPHHVV 254
           IYRP +   T L T P++  H++
Sbjct: 33  IYRPDNGKFTALDTDPNLCTHIL 55


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 186 IYRPTSRSVTRLVTYPDVPHHVV 254
           IYRP +   T L T P++  H++
Sbjct: 33  IYRPDNGKFTALDTDPNLCTHIL 55


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 239 HIRVRHESSYRPRCRTVNQF 180
           ++++ H+  YR  CR +  F
Sbjct: 25  YLKIYHKEKYRKFCRILKYF 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,533
Number of Sequences: 336
Number of extensions: 3324
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)