Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0046.Seq
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 32 0.38
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 32 0.38
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical pr... 30 2.1
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF098985-4|AAC67422.2| 373|Caenorhabditis elegans Synaptotagmin... 29 3.6
Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 29 4.7
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 29 4.7
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 307 PTPPSTGHICRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 441
PTP H+C L L ++DF+ +PS++R C F+ LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 307 PTPPSTGHICRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 441
PTP H+C L L ++DF+ +PS++R C F+ LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 575 STIFPSITSQPRSSLDAATSRACTTPVRRPSPTVA 679
ST + TS P +S+ AAT+ TT +PSPT +
Sbjct: 616 STSTTAYTSTPTASIPAATAITTTTAPPKPSPTTS 650
>Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical
protein F35E2.1 protein.
Length = 345
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 344 DFLRSEATKTFEDETRRIRADTAALIHRA--RSVVPRAKSLAPLDTIYSYSYGEPIPTVS 517
+F+ K FE+E + I++ L +SV+P SL L + + +G P+P+
Sbjct: 215 NFVILRFVKHFENENKNIQSKIIQLTQSLLIQSVIPVIVSLPLLLLSFEFYFGIPMPSSF 274
Query: 518 AMTLTLLSFWCPY 556
T L+F P+
Sbjct: 275 GSTWYALTFLGPF 287
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 551 PYAASRIASTIFPSITSQPRSSLDAATSRACTTPVRRPSPTVATLQGAQHQG*REPALVL 730
P +SR IFP +TS PR + A PV+ P++A + R+P + L
Sbjct: 280 PSTSSRPPIPIFPVVTSAPRPNQRPLPHMAPKLPVKVFIPSLARKINSSAVPLRDPKIEL 339
Query: 731 REEQA 745
++ +A
Sbjct: 340 KDPKA 344
>AF098985-4|AAC67422.2| 373|Caenorhabditis elegans Synaptotagmin
protein 6 protein.
Length = 373
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 472 HHLLIFIRRTDPDRFSNDAYIAKLLVPLRSV 564
H + + ++ D DRFS+D I ++L+PL+ V
Sbjct: 181 HDMTLVLQVMDYDRFSSDDPIGEILLPLKHV 211
>Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical
protein F16D3.6 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 344 DFLRSEATKTFED-ETRRIRADTAALIHRARSVVPRAKSLAPLDTIYSYSYGEPIPTVSA 520
+F+ K FE+ +++RI+ + LI +SV+P SL L + + +G P+P+
Sbjct: 215 NFVILRFVKHFENIQSKRIQLTQSLLI---QSVIPVIVSLPLLLLSFEFYFGIPMPSSFG 271
Query: 521 MTLTLLSFWCPY 556
T L+F P+
Sbjct: 272 STWYALTFLGPF 283
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 581 IFPSITSQPRSSLDAATSRA--CTTPVRRPSPTVATL 685
I S QP A TS+A T P+R PSP VAT+
Sbjct: 879 ILSSEVLQPTRLPSATTSQAKPVTQPIRHPSPPVATV 915
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 581 IFPSITSQPRSSLDAATSRA--CTTPVRRPSPTVATL 685
I S QP A TS+A T P+R PSP VAT+
Sbjct: 986 ILSSEVLQPTRLPSATTSQAKPVTQPIRHPSPPVATV 1022
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,914
Number of Sequences: 27780
Number of extensions: 340231
Number of successful extensions: 1035
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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