Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0045.Seq
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 40 0.002
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 38 0.010
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.070
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 32 0.37
SB_55834| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 32 0.49
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 32 0.49
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.86
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.86
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 31 1.1
SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11) 31 1.1
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 31 1.1
SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40) 30 1.5
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 30 2.0
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 30 2.0
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 30 2.0
SB_48647| Best HMM Match : Pencillinase_R (HMM E-Value=0.17) 29 3.5
SB_25191| Best HMM Match : zf-B_box (HMM E-Value=1.1) 29 3.5
SB_16703| Best HMM Match : RVT_1 (HMM E-Value=0.41) 29 3.5
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.5
SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_44626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_23783| Best HMM Match : ABC_tran (HMM E-Value=6.7e-07) 29 4.6
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 28 6.0
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 28 6.0
SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.0
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 28 6.0
SB_35606| Best HMM Match : SspK (HMM E-Value=4.4) 28 6.0
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 28 6.0
SB_29310| Best HMM Match : RGS (HMM E-Value=0.86) 28 6.0
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 28 6.0
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 28 6.0
SB_2392| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 28 8.0
SB_25830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -2
Query: 493 RNIAMVFQNYALYPHMTVYDNMAFG-LKMQKIAKEVIDERVNWAAQILGLREYLKRKPGA 317
R + MVFQ + L+PH+TV +N+ G ++++K+ K + + + + E + P
Sbjct: 97 RKVGMVFQQFNLFPHLTVLENLTIGPIRVRKMGKAAAEALARNYLERVHIPEQADKYPSQ 156
Query: 316 LSGGQRQRVALGRAI 272
LSGGQ+QRVA+ RA+
Sbjct: 157 LSGGQQQRVAIARAL 171
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 39.5 bits (88), Expect = 0.002
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Frame = -1
Query: 656 EGLQLEIADKEFIVFVARSGCGKSTTCA*LPGLRRSAAAIC*STANE*MSSSQSTQYSDG 477
+GL L + + + + F+ +G GK+TT + L GL A ++ +++ G
Sbjct: 519 DGLNLNLYEGQIMSFLGHNGAGKTTTMSILTGLFPPTAGTGYIYGHDIRFDMDKIRHNLG 578
Query: 476 V-PELRVVSAYDGLRQHGVWSEDAKNRQRGD**AGELGGANSRPA*VPET*AGGAFRRAT 300
+ P+ V+ +DGL + ++G N R V ET +GG R+ +
Sbjct: 579 MCPQHNVL--FDGLVE-------------------DIGLPNKRNCAV-ETLSGGMKRKLS 616
Query: 299 SASGAWAGDCTRSGRFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMT 120
A AG T ++DEP + +D R + + K K T++ TH EA
Sbjct: 617 VAMAFVAGSRT----VILDEPTAGVDPYARRAIWDLLIK--YKKGRTILLSTHFMEEADI 670
Query: 119 MATRIVIMKDGIVQQVGAP 63
+ RI I+ G ++ VG+P
Sbjct: 671 LGDRIAIISSGKLRCVGSP 689
>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -2
Query: 478 VFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQIL---GLREYLKRKPGALSG 308
+ Q+ L PH+TV ++M + +D++ +IL GL E + +SG
Sbjct: 203 IMQDDVLLPHLTVMESMMVSANLHLKENMPLDDKERLIKEILINLGLLETADTRLSEVSG 262
Query: 307 GQRQRVALGRAIV 269
GQR+RVA+ ++
Sbjct: 263 GQRKRVAIALELI 275
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -1
Query: 332 T*AGGAFRRATSASGAWAGDCTRSGRFLMDEPLSNLDAKL--RVQMRAEISKLHQKLNTT 159
T +GG R + A ++ R+ L+D+PLS +DA + V R + L Q TT
Sbjct: 270 TLSGGQCSRISLARAVYS----RASVILLDDPLSRVDAAVGRHVFDRCILKLLGQ---TT 322
Query: 158 MIYVTHDQTEAMTMATRIVIMKDGIVQQVG 69
+ VTH + + A +++M+DG++++ G
Sbjct: 323 RVVVTH-HLKCLKAANHVIVMEDGMIREQG 351
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -2
Query: 445 TVYDNMAFGLKMQKIA-KEVIDE-RVNWAAQILGLREY--LKRKPGALSGGQRQRVALGR 278
T+ +N+ FGLK + K+V+D + + L R+ + + LSGGQ R++L R
Sbjct: 224 TIRENITFGLKFDSLFYKQVVDACALEHDFRFLPERDLTVIGARGMTLSGGQCSRISLAR 283
Query: 277 AIVREAGV 254
A+ A V
Sbjct: 284 AVYSRASV 291
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 34.7 bits (76), Expect = 0.070
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = -2
Query: 445 TVYDNMAFGLKMQKIAKEVIDERVNWAAQI----LGLREYLKRKPGALSGGQRQRVALGR 278
TV +N+ FG + K A E + + A I G + ++ +LSGGQR RV+L R
Sbjct: 535 TVRENITFGKEYDKAAYEKAIKVCDLAKDINRFPKGDLSCIGQRGVSLSGGQRARVSLAR 594
Query: 277 AIVREAGVF 251
A+ +A ++
Sbjct: 595 AVYADADIY 603
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -1
Query: 254 FLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQ 75
+L+D+PLS +DAK+ + E N I VTH Q + + A I+++ DG + Q
Sbjct: 603 YLLDDPLSAVDAKVGSHLFKECI-CGALTNKVRILVTH-QLQYLKHADSIIVLSDGKIAQ 660
Query: 74 VG 69
G
Sbjct: 661 KG 662
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -1
Query: 254 FLMDEPLSNLDAKLRVQMRAEISKLHQKLNT-TMIYVTHDQTEAMTMATRIVIMKDGIVQ 78
+L+D+PLS +D+ + + ++ KL T + VTH + +IV+++DG V
Sbjct: 692 YLLDDPLSAVDSHVGKHIFDKVIGPRGKLRKKTRVLVTHG-ISFLPQVDQIVVLQDGRVS 750
Query: 77 QVGAPK 60
+VG K
Sbjct: 751 EVGTYK 756
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LSGGQ+QRV L RA+ A V+
Sbjct: 671 LSGGQKQRVNLARAVYFNADVY 692
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -1
Query: 254 FLMDEPLSNLDAKL-RVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQ 78
+L+D+PL +D+K+ R I + K T I VTH Q + + A I++MKDG +
Sbjct: 631 YLLDDPLGTVDSKVGRHLFERCIQGILSK--KTRILVTH-QLQYLQNADHILLMKDGGIT 687
Query: 77 QVGA 66
+ G+
Sbjct: 688 REGS 691
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LSGGQR RVAL RA+ +A ++
Sbjct: 610 LSGGQRTRVALARAVYADADIY 631
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = -1
Query: 326 AGGAFRRATSASGAWAGDCTRSGRFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYV 147
+ G +R S + A GD +DEP + +D R + +S++ + +I
Sbjct: 1452 SSGGNKRKLSTAIALVGD---PPVVFLDEPTTGMDPVARRLLWDALSRVRAE-GRCIIIT 1507
Query: 146 THDQTEAMTMATRIVIMKDGIVQQVGAPK 60
+H E + TR+ IM +G + +G+P+
Sbjct: 1508 SHSMEECDALCTRLAIMVNGRFKCLGSPQ 1536
>SB_55834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = +2
Query: 359 LRRPVHPLINHLFGDFLHLQTKRHVVVNRHMRIQRVILEHHRYIACFGWNSFIRLPSINR 538
LR PV PL +HL F H T + RH + +HH Y+ FG S + +P I
Sbjct: 122 LRHPVTPLPDHL---FRHYVTPLPDYLFRH--DVTPLPDHHHYLTMFG--STVAVPLILA 174
Query: 539 SPPLISSSP 565
+P +SP
Sbjct: 175 APMCYDNSP 183
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/80 (23%), Positives = 42/80 (52%)
Frame = -2
Query: 493 RNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGAL 314
RNI + Q ++ +TV +++ F K++ + + + +GL+E L
Sbjct: 571 RNIGVCPQQDVIFEFLTVKEHLEFYFKLKTGGDSQQNNGADAILKEIGLQEKKDDIAKNL 630
Query: 313 SGGQRQRVALGRAIVREAGV 254
SGGQ++++++G ++V + V
Sbjct: 631 SGGQKRKLSVGISLVGDPKV 650
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = -2
Query: 445 TVYDNMAFGLKMQKIAKEVIDERVNWA--AQIL-----GLREYLKRKPGALSGGQRQRVA 287
++ +N+A+G +++ + I + A A + G + + LSGGQRQR+A
Sbjct: 1140 SIAENIAYGAASSEVSMDAIKDAARQANAANFIESFPNGYDTIVGERGQMLSGGQRQRIA 1199
Query: 286 LGRAIVR 266
+ RAI++
Sbjct: 1200 IARAILK 1206
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 31.9 bits (69), Expect = 0.49
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Frame = -2
Query: 505 PAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRK 326
P I +V Q AL+ T+ +N+ +G V + AA++ +++ +
Sbjct: 706 PENGSRIGVVSQEPALFA-TTIAENIRYG------QDGVTQAEIEQAAKMANAHDFITKL 758
Query: 325 P-----------GALSGGQRQRVALGRAIVR 266
P LSGGQ+QRVA+ RA+VR
Sbjct: 759 PKGYETVVGEQGSQLSGGQKQRVAIARALVR 789
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 653 GLQLEIADKEFIVFVARSGCGKST 582
GL L + + + V SGCGKST
Sbjct: 672 GLSLTVRSGQTVALVGESGCGKST 695
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
+LSGGQR RV+L RA+ +A +F
Sbjct: 603 SLSGGQRSRVSLARAVYSDADIF 625
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 656 EGLQLEIADKEFIVFVARSGCGKSTTCA 573
EG+ LE+ KE I V R+G GKS+ A
Sbjct: 1093 EGVNLEVDPKEKIGIVGRTGAGKSSLVA 1120
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 254 FLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQ 75
FLMD+PLS +DA++ + E + + N I TH Q + + A IV + G V
Sbjct: 625 FLMDDPLSAVDARVGQHIFDECI-MGELGNKLRILATH-QLQHLPRADHIVALNKGRVTT 682
Query: 74 VGA 66
G+
Sbjct: 683 QGS 685
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
ALSGGQR RV+L RA+ +A ++
Sbjct: 533 ALSGGQRARVSLARAVYADAEIY 555
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = -2
Query: 487 IAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVID---ERVNWAAQILGLREYLKRKPG- 320
I +V Q L+ + ++ N+A+G ++++ I+ + N I GL + + G
Sbjct: 745 IGIVSQEPVLFGY-SIAQNIAYGDNSREVSMAEIETAAKAANIHNFICGLPKGYDTEVGD 803
Query: 319 ---ALSGGQRQRVALGRAIVR 266
+SGGQ+QR+A+ RA++R
Sbjct: 804 KGTLISGGQKQRIAIARALIR 824
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 653 GLQLEIADKEFIVFVARSGCGKSTT 579
GL LE+ + + V SGCGKSTT
Sbjct: 687 GLSLEVNQGQTLALVGPSGCGKSTT 711
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 352 GLREYLKRKPGALSGGQRQRVALGRAIVR 266
G + + +SGGQ+QR+A+ RA+V+
Sbjct: 244 GYNTVVGERGAQMSGGQKQRIAIARALVK 272
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 656 EGLQLEIADKEFIVFVARSGCGKST 582
+GL L I + + V SGCGKST
Sbjct: 136 KGLHLTIRSGQTVALVGESGCGKST 160
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +2
Query: 377 PLINHLFGDFLHLQTKRHVVVNRHMRIQRVILEHHRYIACFGWNSFIRLPSINRSPPLIS 556
P +H DF T+ + R MR + + R ++ G + NRSP ++
Sbjct: 937 PSASHQEEDFFLRTTQFTDGLLREMRARDLHSSRERVLSSTGIDEGFH--GENRSPRSLA 994
Query: 557 SSPAIMRRWSTYRSPNGRQTR*TL 628
SSP RR S+ SP G TR +L
Sbjct: 995 SSPRRERRCSSEVSPRGDTTRYSL 1018
>SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11)
Length = 406
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
ALSGGQR RV+L RA+ +A ++
Sbjct: 196 ALSGGQRARVSLARALYLDADIY 218
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
ALSGGQR RV+L RA+ +A ++
Sbjct: 904 ALSGGQRARVSLARALYLDADIY 926
>SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40)
Length = 665
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
A+SGGQR RV+L RA+ +A ++
Sbjct: 312 AMSGGQRARVSLARAVYLDADIY 334
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVR 266
LSGGQ+QR+A+ RA++R
Sbjct: 493 LSGGQKQRIAIARALIR 509
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
A+SGGQR RV+L RA+ +A ++
Sbjct: 444 AMSGGQRARVSLARAVYLDADIY 466
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
ALSGGQ+ RV L RA+ +A ++
Sbjct: 251 ALSGGQKARVTLARAVYSDADIY 273
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = -1
Query: 254 FLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQ 75
+L+D+PLS++DAK+ + E K + T + VTH Q + + A +V+M G V
Sbjct: 559 YLLDDPLSSVDAKVGRHIFDECVCGILK-DKTRVLVTH-QLQYLKGADHVVVMNAGSVAF 616
Query: 74 VGAPKTVYNQP 42
G + + P
Sbjct: 617 EGTYEELRAHP 627
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -2
Query: 445 TVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGA----LSGGQRQRVALGR 278
TV +N+ FG K Q+ +V+ + + + G LSGGQR R+ L R
Sbjct: 491 TVRENVLFGKKYQQWKYQVVVRACDLEKDLNEFPDRDLTTIGEHGVLLSGGQRTRIGLAR 550
Query: 277 AIVREAGVF 251
A+ +A ++
Sbjct: 551 ALYADADIY 559
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -2
Query: 445 TVYDNMAFGLKMQKIAKEVIDERVNWAAQIL----GLREYLKRKPGALSGGQRQRVALGR 278
T+ +N+ FG +M++ + E + + + G + + +LSGGQ+ RV+L R
Sbjct: 645 TIRENITFGKQMEEERYNKVLEVCSLVSDLSLFPRGDLTVIGERGASLSGGQQSRVSLAR 704
Query: 277 AIVREAGVF 251
A+ + ++
Sbjct: 705 AVYADVEIY 713
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 656 EGLQLEIADKEFIVFVARSGCGKSTTCA 573
EG+ LE+ KE + V R+G GKS+ A
Sbjct: 1013 EGISLEVQPKEKVGIVGRTGAGKSSLVA 1040
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LS GQR RV+L RA+ +A +F
Sbjct: 524 LSRGQRSRVSLARAVYSDADIF 545
>SB_48647| Best HMM Match : Pencillinase_R (HMM E-Value=0.17)
Length = 1084
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 310 RKAPPAYVSGTHAGREFAPPSSPAHQSPLWRFFASSDQTPCCRKPS 447
R +PP V G + +S + SP+ R F + +P CR PS
Sbjct: 56 RNSPPTIVGYRKTGSQ----NSSRNNSPVQRRFENEQSSPVCRSPS 97
>SB_25191| Best HMM Match : zf-B_box (HMM E-Value=1.1)
Length = 282
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 88 PSFIITIRVAMVIASV*SWVT*IMVVFSF*CSLLISARICTRSLASRLESGSSIKKRPLR 267
P+ + +++ M A+ SW + + F F S I A T + A+ + + I
Sbjct: 143 PTLVAHLQLLMEKAASYSWSS--VRNFHFSISSAIEAGRLTWNDATVIRDRAQIAFTHAD 200
Query: 268 VQSPAQ-AP---LADVARRKAPPAYVSGTHAGREFAPPSSPAHQSPL 396
++S +Q AP ++ A+ K H G+ F PP+ PA++S L
Sbjct: 201 LRSASQSAPRNGISSAAKAKKELYCKDWNHTGKYFCPPTDPAYKSVL 247
>SB_16703| Best HMM Match : RVT_1 (HMM E-Value=0.41)
Length = 523
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +1
Query: 88 PSFIITIRVAMVIASV*SWVT*IMVVFSF*CSLLISARICTRSLASRLESGSSIKKRPLR 267
P+ + +++ M A+ SW + + F F S I A T + A+ + + I
Sbjct: 143 PTLVAHLQLLMEKAASYSWSS--VRNFHFSISSAIEAGRLTWNDATVIRDRAQIAFTHAD 200
Query: 268 VQSPAQ-AP---LADVARRKAPPAYVSGTHAGREFAPPSSPAHQSPL 396
++S +Q AP ++ A+ K H G+ F PP+ PA++S L
Sbjct: 201 LRSASQSAPRNGISSAAKAKKELYCKDWNHTGKYFCPPTDPAYKSVL 247
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
+LSGGQR R++L RA+ A +F
Sbjct: 553 SLSGGQRSRLSLARAVYSGADIF 575
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 656 EGLQLEIADKEFIVFVARSGCGKSTTCA*LPGLRRSAAAI 537
+G+ LE+ KE + V R+G GKS+ A L +R I
Sbjct: 1043 DGVSLEVLPKEKVGIVGRTGAGKSSLVAALFRIREPKGRI 1082
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = -1
Query: 326 AGGAFRRATSASGAWAGDCTRSGRFLMDEPLSNLDAKL--RVQMRAEISKLHQKLNTTMI 153
+GG R + A ++G + FL+D+PLS +D ++ + + +L KL I
Sbjct: 555 SGGQRSRLSLARAVYSG----ADIFLLDDPLSAVDTQVGQHIFDKCICGELKSKLR---I 607
Query: 152 YVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPA 39
TH Q + + A ++I+ G V G + N A
Sbjct: 608 LATH-QAQHLPRADHVMILDKGRVATQGRYNDIKNSSA 644
>SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.1 bits (62), Expect = 3.5
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = -1
Query: 326 AGGAFRRATSASGAWA-GDCTRSGRFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIY 150
+GG R A +A GD +L+D+PLS +DAK+ + E N I
Sbjct: 198 SGGQKARVNLARAVYADGDI-----YLLDDPLSAVDAKVGKHI-FENCITGVLENKIRIL 251
Query: 149 VTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQ-PANMFV 27
VTH Q + + A I+IM G + G + V ++ PA + V
Sbjct: 252 VTH-QLQHLKNADYIMIMDRGAISHEGDYQQVQDRTPAKICV 292
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -2
Query: 445 TVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLRE----YLKRKPGALSGGQRQRVALGR 278
TV +N+ F + + E + A I+ L + L + +LSGGQ+ RV L R
Sbjct: 150 TVRENILFSKPYDEERYQRTLEACDLAKDIVSLPQGDATILGERGASLSGGQKARVNLAR 209
Query: 277 AIVREAGVF 251
A+ + ++
Sbjct: 210 AVYADGDIY 218
>SB_44626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LSGGQ+QRV L RA+ A V+
Sbjct: 4 LSGGQKQRVNLARAVYFNADVY 25
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LSGGQ+QRV L RA+ A V+
Sbjct: 400 LSGGQKQRVNLARAVYFNADVY 421
>SB_23783| Best HMM Match : ABC_tran (HMM E-Value=6.7e-07)
Length = 210
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LSGGQ+QRV L RA+ A V+
Sbjct: 102 LSGGQKQRVNLARAVYFNADVY 123
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGV 254
+LSGGQR RV+L RA+ + V
Sbjct: 682 SLSGGQRSRVSLARAVYSDCDV 703
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
+LSGGQR R++L RA+ + ++
Sbjct: 474 SLSGGQRARISLARAVYADGDIY 496
>SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 921
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 238 GSSIKKRPLRVQSPAQAPLADVARRKAPPAYVSGTHA--GREFAPPSSPAHQSPLWRFFA 411
G + ++V+S PL R PP ++ + G + +P ++P+ SP
Sbjct: 239 GKESSNKQIKVKSDKPVPL-----RPKPPTFIFHNYGECGTQSSPTNAPSIPSPC----- 288
Query: 412 SSDQTPCCRKPSYADTTRNSGTPSLYCVLWLELI 513
P + A+T+ N GTP + V L+LI
Sbjct: 289 ----EPPENSTAEANTSPNEGTPKIESVFSLQLI 318
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 367 PSSPAHQSPLWRFFASS 417
P+ P H SPLWR A+S
Sbjct: 189 PNGPTHGSPLWRLHAAS 205
>SB_35606| Best HMM Match : SspK (HMM E-Value=4.4)
Length = 188
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 327 SRGRFPAGNVSEWRLGGRLYAKRAFFNG 244
SRG +GNVSE R G AKR+ NG
Sbjct: 81 SRGASKSGNVSENRHGHNKIAKRSLENG 108
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 316 LSGGQRQRVALGRAIVREAGVF 251
LSGGQ+ RV+L RA+ +A V+
Sbjct: 536 LSGGQQARVSLARAVYAKADVY 557
>SB_29310| Best HMM Match : RGS (HMM E-Value=0.86)
Length = 1013
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -1
Query: 278 GDCTRSGRFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRI 105
G+ GR + +++ A ++ R E SK H +L T +Y+ H R+
Sbjct: 196 GNVDDDGRKQWNMIQNSIAAPFSIKPRRENSKFHGQLRTRTLYIAHQPCTGFARGMRV 253
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 524 PSINRSPPLISSSPAIMRRWSTYRSP 601
PS R+P + S+P + R STYR+P
Sbjct: 125 PSTYRAPLYLPSAPLLTERPSTYRAP 150
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = -2
Query: 472 QNYALYPHMTVYDNMAFG--LKMQKIAKEVI-DERVNWAAQILGLREYLKRKPG-----A 317
Q ++ ++TV + + + L++ I K+ + +ER++ ++L L + G
Sbjct: 278 QEDVMHRNLTVKEVLRYQAELRLSSIVKKAMKEERIHQIIELLELERIQDSQIGDETNRG 337
Query: 316 LSGGQRQRVALGRAIV 269
+SGGQR+RV +G +V
Sbjct: 338 ISGGQRKRVNIGMELV 353
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 319 ALSGGQRQRVALGRAIVREAGVF 251
+LSGGQR R++L RA+ + ++
Sbjct: 143 SLSGGQRARISLARAVYADGDIY 165
>SB_2392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 579 GGRLTAARTGDKHDELFIGNFQLKSFTTCTW 671
G RLT R+ ++H + FQL F T TW
Sbjct: 294 GVRLTEKRSYNQHSKTRSARFQLNPFDTDTW 324
>SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 653 GLQLEIADKEFIVFVARSGCGKSTT 579
G+ L++A+ +F + +G GKSTT
Sbjct: 127 GIDLDVAEGDFYALLGPNGAGKSTT 151
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 379 RVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVF 251
RV I + + + + LSGGQ+QR++L RA+ + ++
Sbjct: 145 RVGIGGSIAYVSQQIGERGINLSGGQKQRISLARALYADKDLY 187
>SB_25830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 409 QKIAKEVIDERVNWAAQILGLREYLKRKPGA--LSGGQRQRVAL 284
Q+I + ++D V ++AQI L Y++R P A L G +V L
Sbjct: 202 QRITQAIVDMMVTYSAQIQRLEVYVERIPEAAKLCGDHNGQVPL 245
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,022,648
Number of Sequences: 59808
Number of extensions: 466024
Number of successful extensions: 1391
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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