Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0036.Seq
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457213-1|CAG33494.1| 547|Homo sapiens DDX56 protein. 89 1e-17
BC001235-1|AAH01235.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 89 1e-17
AK222662-1|BAD96382.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 89 1e-17
AK022774-1|BAB14238.1| 547|Homo sapiens protein ( Homo sapiens ... 89 1e-17
AJ131712-1|CAB87992.1| 547|Homo sapiens nucleolar RNA-helicase ... 89 1e-17
AF247666-1|AAG36876.1| 547|Homo sapiens DEAD-box RNA helicase p... 89 1e-17
X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein. 35 0.32
BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.32
BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.32
BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.32
AK091227-1|BAC03616.1| 408|Homo sapiens protein ( Homo sapiens ... 35 0.32
AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens ... 35 0.32
AC009404-1|AAX88947.1| 546|Homo sapiens unknown protein. 35 0.32
CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein. 33 0.74
X79538-1|CAA56074.1| 411|Homo sapiens translation initiation fa... 30 9.1
D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation fac... 30 9.1
BC126113-1|AAI26114.1| 347|Homo sapiens ATXN7L3 protein protein. 30 9.1
BC113595-1|AAI13596.1| 347|Homo sapiens ATXN7L3 protein protein. 30 9.1
BC030534-1|AAH30534.1| 690|Homo sapiens CEP68 protein protein. 30 9.1
BC004873-1|AAH04873.1| 620|Homo sapiens centrosomal protein 68k... 30 9.1
BC002982-1|AAH02982.1| 620|Homo sapiens centrosomal protein 68k... 30 9.1
AK056002-1|BAB71070.1| 222|Homo sapiens protein ( Homo sapiens ... 30 9.1
AC007386-1|AAF03518.2| 532|Homo sapiens unknown protein. 30 9.1
AB011154-1|BAA25508.2| 760|Homo sapiens KIAA0582 protein protein. 30 9.1
>CR457213-1|CAG33494.1| 547|Homo sapiens DDX56 protein.
Length = 547
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -2
Query: 456 RAVTRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPE 277
R+VT+ A+REARLKEIK+ELL+ +KL+ YFE+NP DL LR D LH V+ HL HVP+
Sbjct: 435 RSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPD 494
Query: 276 YLLPAAL 256
YL+P AL
Sbjct: 495 YLVPPAL 501
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FG+E+E+K LL HLP+IYQA L SAT ++DV
Sbjct: 174 FGFEEELKSLLCHLPRIYQAFLMSATFNEDV 204
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 506 FALEEVEGFRYRSRD 462
F +EE+EGFRYR RD
Sbjct: 418 FRMEEIEGFRYRCRD 432
>BC001235-1|AAH01235.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56 protein.
Length = 547
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -2
Query: 456 RAVTRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPE 277
R+VT+ A+REARLKEIK+ELL+ +KL+ YFE+NP DL LR D LH V+ HL HVP+
Sbjct: 435 RSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPD 494
Query: 276 YLLPAAL 256
YL+P AL
Sbjct: 495 YLVPPAL 501
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FG+E+E+K LL HLP+IYQA L SAT ++DV
Sbjct: 174 FGFEEELKSLLCHLPRIYQAFLMSATFNEDV 204
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 506 FALEEVEGFRYRSRD 462
F +EE+EGFRYR RD
Sbjct: 418 FRMEEIEGFRYRCRD 432
>AK222662-1|BAD96382.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56 variant protein.
Length = 547
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -2
Query: 456 RAVTRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPE 277
R+VT+ A+REARLKEIK+ELL+ +KL+ YFE+NP DL LR D LH V+ HL HVP+
Sbjct: 435 RSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPD 494
Query: 276 YLLPAAL 256
YL+P AL
Sbjct: 495 YLVPPAL 501
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FG+E+E+K LL HLP+IYQA L SAT ++DV
Sbjct: 174 FGFEEELKSLLCHLPRIYQAFLMSATFNEDV 204
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 506 FALEEVEGFRYRSRD 462
F +EE+EGFRYR RD
Sbjct: 418 FRMEEIEGFRYRCRD 432
>AK022774-1|BAB14238.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ12712 fis, clone NT2RP1001080, weakly similar to
PROBABLE ATP-DEPENDENT RNA HELICASE DBP9. ).
Length = 547
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -2
Query: 456 RAVTRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPE 277
R+VT+ A+REARLKEIK+ELL+ +KL+ YFE+NP DL LR D LH V+ HL HVP+
Sbjct: 435 RSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPD 494
Query: 276 YLLPAAL 256
YL+P AL
Sbjct: 495 YLVPPAL 501
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FG+E+E+K LL HLP+IYQA L SAT ++DV
Sbjct: 174 FGFEEELKSLLCHLPRIYQAFLMSATFNEDV 204
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 506 FALEEVEGFRYRSRD 462
F +EE+EGFRYR RD
Sbjct: 418 FRMEEIEGFRYRCRD 432
>AJ131712-1|CAB87992.1| 547|Homo sapiens nucleolar RNA-helicase
protein.
Length = 547
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -2
Query: 456 RAVTRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPE 277
R+VT+ A+REARLKEIK+ELL+ +KL+ YFE+NP DL LR D LH V+ HL HVP+
Sbjct: 435 RSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPD 494
Query: 276 YLLPAAL 256
YL+P AL
Sbjct: 495 YLVPPAL 501
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FG+E+E+K LL HLP+IYQA L SAT ++DV
Sbjct: 174 FGFEEELKSLLCHLPRIYQAFLMSATFNEDV 204
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 506 FALEEVEGFRYRSRD 462
F +EE+EGFRYR RD
Sbjct: 418 FRMEEIEGFRYRCRD 432
>AF247666-1|AAG36876.1| 547|Homo sapiens DEAD-box RNA helicase
protein.
Length = 547
Score = 89.0 bits (211), Expect = 1e-17
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = -2
Query: 456 RAVTRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPE 277
R+VT+ A+REARLKEIK+ELL+ +KL+ YFE+NP DL LR D LH V+ HL HVP+
Sbjct: 435 RSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGHVPD 494
Query: 276 YLLPAAL 256
YL+P AL
Sbjct: 495 YLVPPAL 501
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FG+E+E+K LL HLP+IYQA L SAT ++DV
Sbjct: 174 FGFEEELKSLLCHLPRIYQAFLMSATFNEDV 204
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 506 FALEEVEGFRYRSRD 462
F +EE+EGFRYR RD
Sbjct: 418 FRMEEIEGFRYRCRD 432
>X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein.
Length = 610
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 282 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 334
>BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 342 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 394
>BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 342 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 394
>BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 342 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 394
>AK091227-1|BAC03616.1| 408|Homo sapiens protein ( Homo sapiens
cDNA FLJ33908 fis, clone CTONG2008518, highly similar to
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 18. ).
Length = 408
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 80 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 132
>AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens
cDNA FLJ10605 fis, clone NT2RP2005126, highly similar to
H.sapiens mRNA for RNA helicase. ).
Length = 670
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 342 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 394
>AC009404-1|AAX88947.1| 546|Homo sapiens unknown protein.
Length = 546
Score = 34.7 bits (76), Expect = 0.32
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S++++PL V+ +N
Sbjct: 218 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAN 270
>CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein.
Length = 610
Score = 33.5 bits (73), Expect = 0.74
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDV--LSFVSIREKPLMDAVEQHLSN 542
G+E+E+K+++ LP Q +L SAT + V L+ +S+++ PL V+ +N
Sbjct: 282 GFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKGPLYVGVDDDKAN 334
>X79538-1|CAA56074.1| 411|Homo sapiens translation initiation
factor protein.
Length = 411
Score = 29.9 bits (64), Expect = 9.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFVS 590
G++++I ++ +LP Q VL SATL ++L +
Sbjct: 196 GFKEQIYDVYRYLPSATQVVLISATLPHEILEMTN 230
>D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation factor
4AII protein.
Length = 407
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVL 602
G++D+I E+ L Q V ASAT+ DVL
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVFASATMPTDVL 222
>BC126113-1|AAI26114.1| 347|Homo sapiens ATXN7L3 protein protein.
Length = 347
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 253 NEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQNDPLKSFDVKKKKQTAG 89
N+DI ++ + + + KKRK + N S +R K +N L + D K + G
Sbjct: 136 NDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNSDPFKYNNSTG 190
>BC113595-1|AAI13596.1| 347|Homo sapiens ATXN7L3 protein protein.
Length = 347
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 253 NEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQNDPLKSFDVKKKKQTAG 89
N+DI ++ + + + KKRK + N S +R K +N L + D K + G
Sbjct: 136 NDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNSDPFKYNNSTG 190
>BC030534-1|AAH30534.1| 690|Homo sapiens CEP68 protein protein.
Length = 690
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 473 RSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKA 372
R+RDRG PSP + EK S+ + R + T +K+
Sbjct: 439 RTRDRGWPSPRPEREKRTSQSARRPTCTESRWKS 472
>BC004873-1|AAH04873.1| 620|Homo sapiens centrosomal protein 68kDa
protein.
Length = 620
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 473 RSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKA 372
R+RDRG PSP + EK S+ + R + T +K+
Sbjct: 439 RTRDRGWPSPRPEREKRTSQSARRPTCTESRWKS 472
>BC002982-1|AAH02982.1| 620|Homo sapiens centrosomal protein 68kDa
protein.
Length = 620
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 473 RSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKA 372
R+RDRG PSP + EK S+ + R + T +K+
Sbjct: 439 RTRDRGWPSPRPEREKRTSQSARRPTCTESRWKS 472
>AK056002-1|BAB71070.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ31440 fis, clone NT2NE2000763. ).
Length = 222
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 253 NEDIVEDQETVTEKPQVKKRKQNANFGSAKRHKYQARQNDPLKSFDVKKKKQTAG 89
N+DI ++ + + + KKRK + N S +R K +N L + D K + G
Sbjct: 11 NDDINDNDWSYGSEKKAKKRKSDKNPNSPRRSKSLKHKNGELSNSDPFKYNNSTG 65
>AC007386-1|AAF03518.2| 532|Homo sapiens unknown protein.
Length = 532
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 473 RSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKA 372
R+RDRG PSP + EK S+ + R + T +K+
Sbjct: 439 RTRDRGWPSPRPEREKRTSQSARRPTCTESRWKS 472
>AB011154-1|BAA25508.2| 760|Homo sapiens KIAA0582 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 473 RSRDRGAPSPG*QSEKLDSKRSNRSSSTVKSYKA 372
R+RDRG PSP + EK S+ + R + T +K+
Sbjct: 442 RTRDRGWPSPRPEREKRTSQSARRPTCTESRWKS 475
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,155,332
Number of Sequences: 237096
Number of extensions: 2054447
Number of successful extensions: 13399
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13373
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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