Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0036.Seq
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 32 0.34
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 31 1.0
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 1.0
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 31 1.0
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 30 1.8
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 30 1.8
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 29 3.2
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 29 3.2
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 5.5
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 9.7
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical... 27 9.7
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -2
Query: 447 TRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQ-HLAHVPEYL 271
T+ +++ARLKEI+QEL+ LQ +F +N + ++ D +K+ +A V Y+
Sbjct: 461 TKGVIKKARLKEIRQELMRSANLQTFFAKNEREKLLMQTDCHPVMLKINSPAIADVTSYM 520
Query: 270 LPAAL 256
+P AL
Sbjct: 521 VPEAL 525
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FGYE+E+ ++ S LP YQ ++ SATL DD+
Sbjct: 185 FGYEEEMIKIRSKLPPTYQCLMTSATLKDDM 215
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -2
Query: 447 TRIAVREARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQ-HLAHVPEYL 271
T+ +++ARLKEI+QEL+ LQ +F +N + ++ D +K+ +A V Y+
Sbjct: 528 TKGVIKKARLKEIRQELMRSANLQTFFAKNEREKLLMQTDCHPVMLKINSPAIADVTSYM 587
Query: 270 LPAAL 256
+P AL
Sbjct: 588 VPEAL 592
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 697 FGYEDEIKELLSHLPKIYQAVLASATLSDDV 605
FGYE+E+ ++ S LP YQ ++ SATL DD+
Sbjct: 252 FGYEEEMIKIRSKLPPTYQCLMTSATLKDDM 282
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFVSI 587
G+E E++++L HLPK Q++L SAT S V V +
Sbjct: 231 GFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKL 266
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVL 602
G++D+I E+ +P+ Q VL SAT+ +VL
Sbjct: 187 GFKDQIYEVFRSMPQDVQVVLLSATMPSEVL 217
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVL 602
G++D+I E+ +P+ Q VL SAT+ +VL
Sbjct: 146 GFKDQIYEVFRSMPQDVQVVLLSATMPSEVL 176
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVL 602
G++D+I E+ +P+ Q VL SAT+ +VL
Sbjct: 187 GFKDQIYEVFRSMPQDVQVVLLSATMPSEVL 217
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = -1
Query: 673 ELLSHLPKIYQAVLASATLSDDVLSFVSI----REKPLMDAVEQHLSNGFKGQKVLQKYN 506
E + + KI+ + S D V F+ ++ LM + + G ++Q +N
Sbjct: 1819 EFVDQIQKIFPEEIMSLLDKDAVDRFLGAIADQSDEGLMISEAERRIIGSSASSLIQLWN 1878
Query: 505 LH*KKWKGSDTAPETVARRHQDSSQ 431
L K WK E HQD+ Q
Sbjct: 1879 LTVKSWKSGKVPTERTGISHQDAKQ 1903
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 292 GTCTRIPASGCPANEDIVEDQE-TVTEKPQV 203
GT TR PA+G P +E VE+ E T T P V
Sbjct: 912 GTLTRGPATGSPIDETTVEELESTTTTLPSV 942
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 292 GTCTRIPASGCPANEDIVEDQE-TVTEKPQV 203
GT TR PA+G P +E VE+ E T T P V
Sbjct: 912 GTLTRGPATGSPIDETTVEELESTTTTLPSV 942
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 292 GTCTRIPASGCPANEDIVEDQE-TVTEKPQV 203
GT TR PA+G P +E VE+ E T T P V
Sbjct: 912 GTLTRGPATGSPIDETTVEELESTTTTLPSV 942
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 292 GTCTRIPASGCPANEDIVEDQE-TVTEKPQV 203
GT TR PA+G P +E VE+ E T T P V
Sbjct: 912 GTLTRGPATGSPIDETTVEELESTTTTLPSV 942
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFVS 590
G+++++ ++ +LP Q VL SATL ++L S
Sbjct: 184 GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTS 218
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFVS 590
G+++++ ++ +LP Q VL SATL ++L S
Sbjct: 184 GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTS 218
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 660 TFQKSIKQFSLQPLCQMMCCHSCQYARNL 574
T Q S QP+CQ C ++CQ A +
Sbjct: 317 TCQSSATVLQCQPICQQTCQNTCQQAAQI 345
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = -2
Query: 432 REARLKEIKQELLNCKKLQGYFEENPSDLAALRRDKALHTVKVQQHLAHVPEYLLPAALP 253
RE + E+K+ + +K + + + + KA T + AH PE +
Sbjct: 158 REEFMNEMKKHKIELEKKKSLGKNDSKTTIEIPTPKAAETQQEHVKFAHAPEIAGNSQKA 217
Query: 252 MKILWKTRKQSPRNLKLRNESRMR-TLEVLKDIN 154
++I +T++++P +K + ++M +EV + +N
Sbjct: 218 VRIQSETQEEAPVAVKNLSANKMNDQIEVSQLMN 251
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 250 EDIVEDQETVTEKPQVK-KRKQNANFGSAKRHKYQARQNDPLKSFDVKKKKQTAGE 86
+D ED++ +KP K ++K+ + K K + ++ +P KS KK+ + GE
Sbjct: 147 KDKKEDEKKDDKKPGEKEEKKEEVKKETKKEEKKEEKKEEPKKSEAPKKEGEPKGE 202
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 250 EDIVEDQETVTEKPQVK-KRKQNANFGSAKRHKYQARQNDPLKSFDVKKKKQTAGE 86
+D ED++ +KP K ++K+ K K + ++ +P K+ KK+ +T GE
Sbjct: 153 KDKKEDEKMDDKKPGEKEEKKEEFKKEMKKEEKKEEKKEEPKKNDAPKKEGETKGE 208
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 663 VTFQKSIKQFSLQPLCQMMCCHSCQYARNL*WMQSS 556
VT+Q Q + P CQ C + CQ+A ++ QSS
Sbjct: 73 VTYQVQTSQCA--PACQQSCQNQCQFAPSMNECQSS 106
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 663 VTFQKSIKQFSLQPLCQMMCCHSCQYARNL*WMQSS 556
VT+Q Q + P CQ C + CQ+A ++ QSS
Sbjct: 74 VTYQVQTSQCA--PACQQSCQNQCQFAPSMNECQSS 107
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 3 FFFFFLNKVNIYFTKITVHYLLISRYQVSPAVCFFFLTSKLFS 131
FF +FL+ N YF V + ++R + ++ F+F+ K++S
Sbjct: 93 FFCYFLHFGNAYFQYFMVTLMAVNR---TTSIFFYFVNEKIWS 132
>AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical
protein Y18H1A.15 protein.
Length = 654
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -1
Query: 694 GYEDEIKELLSHLPKIYQAVLASATLSDDVLSFVSIREKPLMDAVE 557
GY D + + HLP I Q +++ L +L F+ + + L + +E
Sbjct: 83 GYSDVLAIVFRHLPTIRQIIISVLCLITALLIFLVVWKLLLFEVIE 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,107,990
Number of Sequences: 27780
Number of extensions: 326757
Number of successful extensions: 1225
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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