Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0035.Seq
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   7.3  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   7.3  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   9.7  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 333 FNDKTLLNDILDK*QVKYLPLYN 265
           +N+K LL+D+LD   +   P+ N
Sbjct: 37  YNEKRLLHDLLDSYNILERPVVN 59


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 181 NAQIATFDNRRLTYDIHNAVQIIQKCFVVLINVKHHSLICPLT 53
           N  IA+FDNR  TY+ H+    I       I   H +++  L+
Sbjct: 122 NGNIASFDNRGNTYN-HSGTGDIHSYLYEQIEDLHKAILDQLS 163


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 167 GNLCIWTKKC 196
           G  CIW KKC
Sbjct: 84  GGSCIWAKKC 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,583
Number of Sequences: 2352
Number of extensions: 13897
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)