Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0035.Seq
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052143-1|AAK93567.1|  942|Drosophila melanogaster SD10311p pro...    30   3.7  
AE014297-804|AAF54281.3|  942|Drosophila melanogaster CG8202-PA ...    30   3.7  

>AY052143-1|AAK93567.1|  942|Drosophila melanogaster SD10311p
           protein.
          Length = 942

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
 Frame = +2

Query: 191 KCY*YVNTD*FEYNRLLQR----IRSKPALYKGKYLTCYLSKMSFRRVLSLNTKSIIR-- 352
           KCY ++++   EY R+LQR    +R         Y  CYL +M    V   ++K+ IR  
Sbjct: 284 KCYEFLSSSREEYERILQRLTHQLRGIADPLVSSYARCYLVRMG---VTLTSSKTYIREN 340

Query: 353 FSDLPII 373
           F+DL +I
Sbjct: 341 FADLFLI 347


>AE014297-804|AAF54281.3|  942|Drosophila melanogaster CG8202-PA
           protein.
          Length = 942

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
 Frame = +2

Query: 191 KCY*YVNTD*FEYNRLLQR----IRSKPALYKGKYLTCYLSKMSFRRVLSLNTKSIIR-- 352
           KCY ++++   EY R+LQR    +R         Y  CYL +M    V   ++K+ IR  
Sbjct: 284 KCYEFLSSSREEYERILQRLTHQLRGIADPLVSSYARCYLVRMG---VTLTSSKTYIREN 340

Query: 353 FSDLPII 373
           F+DL +I
Sbjct: 341 FADLFLI 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,677,472
Number of Sequences: 53049
Number of extensions: 577619
Number of successful extensions: 949
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)