Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0035.Seq
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 34 0.091
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 34 0.091
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 34 0.091
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 34 0.091
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 34 0.091
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 33 0.16
U40422-5|AAA81448.2| 494|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
F31B12.1c protein.
Length = 1895
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
F31B12.1b protein.
Length = 1868
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 260 PALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDLPIIVQ-KSHCRL 397
P +Y G L +SK+ FR+V+ + KS SDLP+I+ ++HC L
Sbjct: 966 PLIYHGHTL---VSKIGFRQVVEIIKKSAFITSDLPVILSIENHCSL 1009
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/54 (27%), Positives = 34/54 (62%)
Frame = +2
Query: 203 YVNTD*FEYNRLLQRIRSKPALYKGKYLTCYLSKMSFRRVLSLNTKSIIRFSDL 364
Y+N + +Y + + R+ +K ++++ KYL CY ++ ++ +L+L +R+ DL
Sbjct: 3901 YINPEHLDYFKFVGRLIAK-SVFEHKYLDCYFTRAFYKHILNLP----VRYQDL 3949
>U40422-5|AAA81448.2| 494|Caenorhabditis elegans Hypothetical
protein T24D8.1 protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = -2
Query: 116 YPEMFCRANKR*ASQPDLSADDFLVFLLPQGQI 18
+P+++ AN R A+ D++ D+FLV++ P G++
Sbjct: 115 HPDVYF-ANARSAAFQDITDDNFLVWVYPNGRV 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,764,623
Number of Sequences: 27780
Number of extensions: 318990
Number of successful extensions: 711
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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