Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0034.Seq
(678 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 141 7e-35
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 140 2e-34
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 117 1e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 106 3e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 83 3e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 69 5e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 62 5e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 58 2e-09
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.5
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.4
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.8
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.6
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 7.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 141 bits (342), Expect = 7e-35
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSSS QASI IDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DK
Sbjct: 267 RAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDK 326
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
A +++IVLVGGSTRIP+VQKL+ D
Sbjct: 327 ASVNEIVLVGGSTRIPRVQKLVSD 350
Score = 107 bits (256), Expect = 2e-24
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEK 674
LIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK
Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEK 491
Score = 77.4 bits (182), Expect = 2e-15
Identities = 43/94 (45%), Positives = 48/94 (51%)
Frame = +1
Query: 226 PQGAEAPARFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 405
P+ + + FFNGKE KSINPDE +L GD SE+ QD GI
Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGI 401
Query: 406 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPG 507
ETAGGVMT LIKRN YSDNQPG
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPG 435
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 140 bits (339), Expect = 2e-34
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSSS QASI IDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK
Sbjct: 267 RAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDK 326
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+ +++IVLVGGSTRIP++QKL+ D
Sbjct: 327 SSVNEIVLVGGSTRIPRIQKLVSD 350
Score = 107 bits (256), Expect = 2e-24
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEK 674
LIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK
Sbjct: 437 LIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEK 491
Score = 75.8 bits (178), Expect = 5e-15
Identities = 42/85 (49%), Positives = 44/85 (51%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKE KSINPDE IL GD SE+ QD GIETAGGVMT
Sbjct: 351 FFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTP 410
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQPG 507
LIKRN Y+DNQPG
Sbjct: 411 LIKRNTTIPTKKSEVFSTYADNQPG 435
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 117 bits (282), Expect = 1e-27
Identities = 54/84 (64%), Positives = 70/84 (83%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKR LSS TQ ++ +DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ K
Sbjct: 271 RAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPK 330
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
A +HDIVLVGGSTRIPKVQ+L+ D
Sbjct: 331 ADVHDIVLVGGSTRIPKVQRLVSD 354
Score = 72.1 bits (169), Expect = 7e-14
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +3
Query: 519 VFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+
Sbjct: 445 VYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKT 497
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMT 429
FF+G+ LNKSINPDE +L + S++ QD G+ G V
Sbjct: 355 FFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFG 414
Query: 430 TLIKRNXXXXXXXXXXXXXYSDNQ 501
+ RN +DNQ
Sbjct: 415 VVCPRNTPIPTIKKRTFTTVADNQ 438
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 106 bits (254), Expect = 3e-24
Identities = 49/94 (52%), Positives = 71/94 (75%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
+AKRTLSS I I+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K
Sbjct: 299 KAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKK 358
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQDSLMERSSTNL 283
++I DIVLVGGSTRIPKVQ+LL+ +++S +
Sbjct: 359 SEIDDIVLVGGSTRIPKVQELLESFFGKKASKGI 392
Score = 103 bits (247), Expect = 2e-23
Identities = 45/56 (80%), Positives = 53/56 (94%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS
Sbjct: 466 LIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKS 521
Score = 41.9 bits (94), Expect = 8e-05
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +1
Query: 226 PQGAEAPARFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 405
P+ E FF GK+ +K INPDE +L G++ + + GI
Sbjct: 374 PKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGI 430
Query: 406 ETAGGVMTTLIKRN 447
ET GGVMT LI RN
Sbjct: 431 ETTGGVMTKLIGRN 444
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 83.4 bits (197), Expect = 3e-17
Identities = 35/55 (63%), Positives = 48/55 (87%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+
Sbjct: 481 IRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKA 535
Score = 55.2 bits (127), Expect = 8e-09
Identities = 24/61 (39%), Positives = 47/61 (77%)
Frame = +2
Query: 86 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDSLME 265
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ S+ +
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVK-SIFK 401
Query: 266 R 268
R
Sbjct: 402 R 402
Score = 37.5 bits (83), Expect = 0.002
Identities = 27/80 (33%), Positives = 33/80 (41%)
Frame = +1
Query: 208 GWLHSYPQGAEAPARFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXX 387
G + P+ E F +E KS+NPDE +L G V+D
Sbjct: 384 GGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVT 438
Query: 388 XXXXGIETAGGVMTTLIKRN 447
GIET GGV T LI RN
Sbjct: 439 PLSLGIETLGGVFTRLINRN 458
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 69.3 bits (162), Expect = 5e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
R K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A +
Sbjct: 303 RVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTF 362
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
++I+ I+L GG++RIP +Q L D
Sbjct: 363 SEINSIILFGGASRIPFIQSTLAD 386
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 62.5 bits (145), Expect = 5e-11
Identities = 29/88 (32%), Positives = 52/88 (59%)
Frame = +2
Query: 8 KRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 187
KR LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M+
Sbjct: 295 KRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFD 354
Query: 188 IHDIVLVGGSTRIPKVQKLLQDSLMERS 271
I +++L GG++ PK+ L++ E++
Sbjct: 355 ISEVILAGGASNTPKLTSLMESIFPEQT 382
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 57.6 bits (133), Expect = 2e-09
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
R K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L A + K
Sbjct: 275 RLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKK 334
Query: 182 AQIHDIVLVGGSTRIPKVQKLL 247
++ I +VGG TR+P V++++
Sbjct: 335 EDLYSIEMVGGCTRVPIVKEVI 356
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 661 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 524
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 194 RGFEPYPSWHHGETSPLAP 138
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 53 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 211
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 306 SYGLVRVNRFV-ELLSIKESCRSFCTLGIRVEPPTSTIS 193
SY L N+++ ++S SC + LG + E +TIS
Sbjct: 242 SYALNESNQYITSIVSPDSSCENIRILGFKAETNAATIS 280
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 120 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 209
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,735,403
Number of Sequences: 5004
Number of extensions: 54799
Number of successful extensions: 189
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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