BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0031.Seq (734 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 113 4e-27 AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.2 EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 9.8 AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 9.8 AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 9.8 >AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70 protein. Length = 78 Score = 113 bits (273), Expect = 4e-27 Identities = 54/63 (85%), Positives = 59/63 (93%) Frame = +2 Query: 509 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTI 688 SQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK GERNVLIFDLGGGTFDVSILTI Sbjct: 13 SQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTI 72 Query: 689 EDG 697 ++G Sbjct: 73 DEG 75 Score = 27.9 bits (59), Expect = 0.34 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +3 Query: 474 NAVITVPAYFNDLKDKPQK 530 +AVITVPAYFND + + K Sbjct: 1 DAVITVPAYFNDSQRQATK 19 >AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. Length = 3361 Score = 24.2 bits (50), Expect = 4.2 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = +3 Query: 54 NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 155 +GK RS + +++LL P REG H+ Q PG Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837 >EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium channel alpha2-delta subunit 1 protein. Length = 1256 Score = 23.0 bits (47), Expect = 9.8 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 715 WIHLEDTILDGKDGHVEGT-AAEVKDKYISFSS 620 W++ E L DG+ EGT + +DK SF + Sbjct: 690 WVYCEYNSLKDADGNGEGTEESTYRDKDESFDT 722 >AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine protease protein. Length = 1322 Score = 23.0 bits (47), Expect = 9.8 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 708 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS-RP*AIAAA 583 T+K+ + M T+ PPP ++ +P P + +P + AAA Sbjct: 572 TTKLSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAA 614 >AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D protein. Length = 1322 Score = 23.0 bits (47), Expect = 9.8 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -3 Query: 708 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS-RP*AIAAA 583 T+K+ + M T+ PPP ++ +P P + +P + AAA Sbjct: 571 TTKLSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAA 613 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 833,493 Number of Sequences: 2352 Number of extensions: 18334 Number of successful extensions: 38 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 38 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 75260343 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -