Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0027.Seq
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   5.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 694  STISLIAPVVATTADVIIADSI*CFL 617
            + ++L+ PVVA    +I+A  + C L
Sbjct: 1606 ANLNLVVPVVAAVLVIIVAIIVICVL 1631


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 500 RGHRAVEFKVVETDPSPFCIVAPD 571
           RG +   +KV E  PSP   V+P+
Sbjct: 102 RGPKRKTWKVEEDSPSPTSSVSPE 125


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 243 HRALDDNCPDEKIRMNHVVRNNLRVRLSDVV--SIAPCPSVK 362
           +R++  N PDEK  +N  +R    + L  V   +   CP  K
Sbjct: 90  YRSIKFNIPDEKNEVNDFLREISWIFLETVANENTTNCPEQK 131


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 TPQGNRLHRALDDNCPDEKIRMNHVVRNNLRVRLSDVVSIAP 347
           TP+G +L   + +    +  + N  V+ N+R  L  ++   P
Sbjct: 52  TPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLIDNKP 93


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 106 WVCPCDGGSRSINHQGFYYLPFYS 35
           W+C     + S   + FYYLP  S
Sbjct: 49  WICALVNYNVSEISENFYYLPAMS 72


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 489 FMVRGGIAPSSSKWSKQIHHHFASW 563
           F   GG+  + SK SKQ+ +    W
Sbjct: 143 FDTLGGLYSTWSKKSKQVEYFLIHW 167


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 489 FMVRGGIAPSSSKWSKQIHHHFASW 563
           F   GG+  + SK SKQ+ +    W
Sbjct: 143 FDTLGGLYSTWSKKSKQVEYFLIHW 167


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 409  VLLAIYSKYT*SRTSWRLTVRSIVTTPSWSA 501
            +LL IYS +  +  SW     ++V  P  +A
Sbjct: 1017 LLLVIYSVFNMNNVSWGTREVTVVPKPDPNA 1047


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 409  VLLAIYSKYT*SRTSWRLTVRSIVTTPSWSA 501
            +LL IYS +  +  SW     ++V  P  +A
Sbjct: 1017 LLLVIYSVFNMNNVSWGTREVTVVPKPDPNA 1047


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 462 YRPIHRDDTFMVRGGIAPSSSKWSKQIHHHFASWLLIP 575
           +R + +DDT MVR   A    + ++ +   +    LIP
Sbjct: 172 FRALCQDDTPMVRRAAATKLGELAQVVELEYLKTDLIP 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,202
Number of Sequences: 336
Number of extensions: 3844
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)