Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0027.Seq
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 156 6e-38
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 156 6e-38
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 156 6e-38
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 156 6e-38
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 156 6e-38
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 156 6e-38
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 102 1e-21
BC036341-1|AAH36341.1| 331|Homo sapiens spondin 2, extracellula... 30 9.1
BC002707-1|AAH02707.1| 331|Homo sapiens spondin 2, extracellula... 30 9.1
AY358948-1|AAQ89307.1| 331|Homo sapiens SPON2 protein. 30 9.1
AK074618-1|BAC11092.1| 331|Homo sapiens protein ( Homo sapiens ... 30 9.1
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 156 bits (379), Expect = 6e-38
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +3
Query: 255 DDNCPDEKIRMNHVVRNNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV 434
DD C DEKIRMN VVRNNLRVRL DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEV
Sbjct: 74 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 133
Query: 435 YLKPYFMEAYRPIHRDDTFMVRGGI 509
YLKPYF+EAYRPI + D F+VRGG+
Sbjct: 134 YLKPYFLEAYRPIRKGDIFLVRGGM 158
Score = 111 bits (266), Expect = 3e-24
Identities = 53/70 (75%), Positives = 66/70 (94%)
Frame = +1
Query: 46 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 225
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 226 RKETVCIVLS 255
R+E VCIVLS
Sbjct: 64 RREAVCIVLS 73
Score = 108 bits (260), Expect = 2e-23
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +2
Query: 503 GHRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
G RAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 157 GMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 210
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 156 bits (379), Expect = 6e-38
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +3
Query: 255 DDNCPDEKIRMNHVVRNNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV 434
DD C DEKIRMN VVRNNLRVRL DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEV
Sbjct: 74 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 133
Query: 435 YLKPYFMEAYRPIHRDDTFMVRGGI 509
YLKPYF+EAYRPI + D F+VRGG+
Sbjct: 134 YLKPYFLEAYRPIRKGDIFLVRGGM 158
Score = 111 bits (267), Expect = 2e-24
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 503 GHRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
G RAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 157 GMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 210
Score = 111 bits (266), Expect = 3e-24
Identities = 53/70 (75%), Positives = 66/70 (94%)
Frame = +1
Query: 46 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 225
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 226 RKETVCIVLS 255
R+E VCIVLS
Sbjct: 64 RREAVCIVLS 73
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 156 bits (379), Expect = 6e-38
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +3
Query: 255 DDNCPDEKIRMNHVVRNNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV 434
DD C DEKIRMN VVRNNLRVRL DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEV
Sbjct: 74 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 133
Query: 435 YLKPYFMEAYRPIHRDDTFMVRGGI 509
YLKPYF+EAYRPI + D F+VRGG+
Sbjct: 134 YLKPYFLEAYRPIRKGDIFLVRGGM 158
Score = 111 bits (267), Expect = 2e-24
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 503 GHRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
G RAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 157 GMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 210
Score = 111 bits (266), Expect = 3e-24
Identities = 53/70 (75%), Positives = 66/70 (94%)
Frame = +1
Query: 46 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 225
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 226 RKETVCIVLS 255
R+E VCIVLS
Sbjct: 64 RREAVCIVLS 73
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 156 bits (379), Expect = 6e-38
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +3
Query: 255 DDNCPDEKIRMNHVVRNNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV 434
DD C DEKIRMN VVRNNLRVRL DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEV
Sbjct: 12 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 71
Query: 435 YLKPYFMEAYRPIHRDDTFMVRGGI 509
YLKPYF+EAYRPI + D F+VRGG+
Sbjct: 72 YLKPYFLEAYRPIRKGDIFLVRGGM 96
Score = 111 bits (267), Expect = 2e-24
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 503 GHRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
G RAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 95 GMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 148
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 156 bits (379), Expect = 6e-38
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +3
Query: 255 DDNCPDEKIRMNHVVRNNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV 434
DD C DEKIRMN VVRNNLRVRL DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEV
Sbjct: 74 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 133
Query: 435 YLKPYFMEAYRPIHRDDTFMVRGGI 509
YLKPYF+EAYRPI + D F+VRGG+
Sbjct: 134 YLKPYFLEAYRPIRKGDIFLVRGGM 158
Score = 111 bits (267), Expect = 2e-24
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 503 GHRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
G RAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 157 GMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 210
Score = 111 bits (266), Expect = 3e-24
Identities = 53/70 (75%), Positives = 66/70 (94%)
Frame = +1
Query: 46 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 225
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 226 RKETVCIVLS 255
R+E VCIVLS
Sbjct: 64 RREAVCIVLS 73
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 156 bits (379), Expect = 6e-38
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +3
Query: 255 DDNCPDEKIRMNHVVRNNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV 434
DD C DEKIRMN VVRNNLRVRL DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEV
Sbjct: 74 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 133
Query: 435 YLKPYFMEAYRPIHRDDTFMVRGGI 509
YLKPYF+EAYRPI + D F+VRGG+
Sbjct: 134 YLKPYFLEAYRPIRKGDIFLVRGGM 158
Score = 111 bits (267), Expect = 2e-24
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 503 GHRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
G RAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 157 GMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 210
Score = 111 bits (266), Expect = 3e-24
Identities = 53/70 (75%), Positives = 66/70 (94%)
Frame = +1
Query: 46 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 225
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 226 RKETVCIVLS 255
R+E VCIVLS
Sbjct: 64 RREAVCIVLS 73
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 102 bits (245), Expect = 1e-21
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +2
Query: 521 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 664
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 48
>BC036341-1|AAH36341.1| 331|Homo sapiens spondin 2, extracellular
matrix protein protein.
Length = 331
Score = 29.9 bits (64), Expect = 9.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 419 QSIRSILEAVLHGGLPSDP--S*RHLHGPRGHRAVEFKVVETDPSPFCIVAPDTVIHCDG 592
++++S+ E +PS + L R H V F VV PSP V D++ CDG
Sbjct: 115 EALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSF-VVRIVPSPDWFVGVDSLDLCDG 173
Query: 593 EPIKREEEEEALNAVGYD 646
+ R E+ AL+ YD
Sbjct: 174 D---RWREQAALDLYPYD 188
>BC002707-1|AAH02707.1| 331|Homo sapiens spondin 2, extracellular
matrix protein protein.
Length = 331
Score = 29.9 bits (64), Expect = 9.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 419 QSIRSILEAVLHGGLPSDP--S*RHLHGPRGHRAVEFKVVETDPSPFCIVAPDTVIHCDG 592
++++S+ E +PS + L R H V F VV PSP V D++ CDG
Sbjct: 115 EALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSF-VVRIVPSPDWFVGVDSLDLCDG 173
Query: 593 EPIKREEEEEALNAVGYD 646
+ R E+ AL+ YD
Sbjct: 174 D---RWREQAALDLYPYD 188
>AY358948-1|AAQ89307.1| 331|Homo sapiens SPON2 protein.
Length = 331
Score = 29.9 bits (64), Expect = 9.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 419 QSIRSILEAVLHGGLPSDP--S*RHLHGPRGHRAVEFKVVETDPSPFCIVAPDTVIHCDG 592
++++S+ E +PS + L R H V F VV PSP V D++ CDG
Sbjct: 115 EALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSF-VVRIVPSPDWFVGVDSLDLCDG 173
Query: 593 EPIKREEEEEALNAVGYD 646
+ R E+ AL+ YD
Sbjct: 174 D---RWREQAALDLYPYD 188
>AK074618-1|BAC11092.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ90137 fis, clone HEMBB1000881, weakly similar to
Danio rerio mRNA for MINDIN2. ).
Length = 331
Score = 29.9 bits (64), Expect = 9.1
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 419 QSIRSILEAVLHGGLPSDP--S*RHLHGPRGHRAVEFKVVETDPSPFCIVAPDTVIHCDG 592
++++S+ E +PS + L R H V F VV PSP V D++ CDG
Sbjct: 115 EALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSF-VVRIVPSPDWFVGVDSLDLCDG 173
Query: 593 EPIKREEEEEALNAVGYD 646
+ R E+ AL+ YD
Sbjct: 174 D---RWREQAALDLYPYD 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,934,324
Number of Sequences: 237096
Number of extensions: 2212104
Number of successful extensions: 4753
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4753
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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