Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0025.Seq
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 275 SPRTSLTEFSMSAESIRTPPQMRCSSRSEPYLPSIG 168
SPR F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 275 SPRTSLTEFSMSAESIRTPPQMRCSSRSEPYLPSIG 168
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 275 SPRTSLTEFSMSAESIRTPPQMRCSSRSEPYLPSIG 168
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 275 SPRTSLTEFSMSAESIRTPPQMRCSSRSEPYLPSIG 168
SPR F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 275 SPRTSLTEFSMSAESIRTPPQMRCSSRSEPYLPSIG 168
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 275 SPRTSLTEFSMSAESIRTPPQMRCSSRSEPYLPSIG 168
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -2
Query: 484 NEHNARTSTRPGTGCIRFPSKPDTPRSSEPILIPKLRIQFADFPYLH 344
++ TR G+ C S+PD P +L+ KL+I+ + H
Sbjct: 43 HDEGCERMTRNGSVCAVEESEPDVPTQHREVLLTKLKIEIKNIMAEH 89
>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical
protein ZK337.1c protein.
Length = 1516
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -3
Query: 336 STRGSSPWRPAADMDTNRRDISTYIPHRIFNV---RREYPDTAANAVLFAFRTISPFYRI 166
+T S +R +D ++ T+ P +NV ++ DT A L +S FY
Sbjct: 362 ATHQISTFREEVKLDVEKQG-DTFKPGLTYNVVVALKQMDDTPVKATLPKRVQVSTFYNY 420
Query: 165 PWN---SNAQAEKKT 130
P+N S+ Q EK+T
Sbjct: 421 PYNHDTSSLQEEKET 435
>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical
protein ZK337.1b protein.
Length = 1501
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -3
Query: 336 STRGSSPWRPAADMDTNRRDISTYIPHRIFNV---RREYPDTAANAVLFAFRTISPFYRI 166
+T S +R +D ++ T+ P +NV ++ DT A L +S FY
Sbjct: 362 ATHQISTFREEVKLDVEKQG-DTFKPGLTYNVVVALKQMDDTPVKATLPKRVQVSTFYNY 420
Query: 165 PWN---SNAQAEKKT 130
P+N S+ Q EK+T
Sbjct: 421 PYNHDTSSLQEEKET 435
>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical
protein ZK337.1a protein.
Length = 1508
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -3
Query: 336 STRGSSPWRPAADMDTNRRDISTYIPHRIFNV---RREYPDTAANAVLFAFRTISPFYRI 166
+T S +R +D ++ T+ P +NV ++ DT A L +S FY
Sbjct: 362 ATHQISTFREEVKLDVEKQG-DTFKPGLTYNVVVALKQMDDTPVKATLPKRVQVSTFYNY 420
Query: 165 PWN---SNAQAEKKT 130
P+N S+ Q EK+T
Sbjct: 421 PYNHDTSSLQEEKET 435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,045,136
Number of Sequences: 27780
Number of extensions: 422274
Number of successful extensions: 1351
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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