Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0023X.Seq
(452 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q74FB0 Cluster: HD domain protein; n=2; Geobacter|Rep: ... 33 2.2
UniRef50_Q4RDG5 Cluster: Chromosome undetermined SCAF16507, whol... 33 2.9
UniRef50_A5WFI6 Cluster: Putative uncharacterized protein precur... 33 2.9
UniRef50_A1U209 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_A3B331 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q6C7Q5 Cluster: Similar to sp|P08640 Saccharomyces cere... 33 2.9
UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplas... 33 3.8
UniRef50_UPI00006609DD Cluster: UPI00006609DD related cluster; n... 32 5.0
UniRef50_Q9F5H1 Cluster: Riorf21 protein; n=1; Agrobacterium rhi... 32 5.0
UniRef50_A3U676 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q2VMT1 Cluster: Phenylalanine ammonia lyase; n=1; Rhodo... 32 6.6
UniRef50_Q3UI92 Cluster: 17 days embryo heart cDNA, RIKEN full-l... 31 8.7
UniRef50_Q09A80 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
>UniRef50_Q74FB0 Cluster: HD domain protein; n=2; Geobacter|Rep: HD
domain protein - Geobacter sulfurreducens
Length = 371
Score = 33.5 bits (73), Expect = 2.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 215 PSFLVVHRVLHHGNHDLVGLPSLAGSWKQ 129
P VV HH HDL G PS+A W+Q
Sbjct: 283 PRLAVVATFEHHLKHDLSGYPSVAAGWRQ 311
>UniRef50_Q4RDG5 Cluster: Chromosome undetermined SCAF16507, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF16507,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 384 RSLRSRWKSSPWMTASAHRATSETTWASTHRRPAPRWSTATSHA 253
RS R RW S W R T+ TT R + RW+T A
Sbjct: 37 RSKRPRWSSLSWRRRRRRRPTTPTTRPPPSRTSSTRWTTGCRSA 80
>UniRef50_A5WFI6 Cluster: Putative uncharacterized protein
precursor; n=1; Psychrobacter sp. PRwf-1|Rep: Putative
uncharacterized protein precursor - Psychrobacter sp.
PRwf-1
Length = 257
Score = 33.1 bits (72), Expect = 2.9
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = -1
Query: 206 LVVHRVLHHGNHDLVGLPSLAGSWKQEQVKIIYYDV 99
++ +R++H G+ LVG+P + G K +Q +++ +D+
Sbjct: 133 VIENRMIHRGSKSLVGIPVVDGQAKLDQAQLLDFDI 168
>UniRef50_A1U209 Cluster: Putative uncharacterized protein; n=1;
Marinobacter aquaeolei VT8|Rep: Putative uncharacterized
protein - Marinobacter aquaeolei (strain ATCC 700491 /
DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 155
Score = 33.1 bits (72), Expect = 2.9
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 396 WMWTRSLRS-RWKSSPWMTASAHRATSETTWASTHRRPAPRWSTA 265
W+W R R RWK S W SE T+ RPAP W A
Sbjct: 44 WLWRRQRRKHRWKRSAW---------SELQQLETNARPAPEWFAA 79
>UniRef50_A3B331 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 103
Score = 33.1 bits (72), Expect = 2.9
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 408 NGRYWMWTRSLRSRWKSSPWMTASAHRATSETTWASTH-RRPAPRWSTATS 259
+G +W WTR+ R+R + SP + + ++S T H RRP P ++T S
Sbjct: 17 DGSWWPWTRARRARTR-SPGASPNVVSSSSGDTLVLLHARRPRPVYATMDS 66
>UniRef50_Q6C7Q5 Cluster: Similar to sp|P08640 Saccharomyces
cerevisiae YIR019c STA1 extracellular alpha-1; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P08640
Saccharomyces cerevisiae YIR019c STA1 extracellular
alpha-1 - Yarrowia lipolytica (Candida lipolytica)
Length = 657
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 387 TRSLRSRWKSSPWMTASAHRATSETTWASTHRRPAPRWSTATSH 256
TRS RSR+ SS + T S T+WA P +T++SH
Sbjct: 574 TRSARSRYSSSSFSTPSTTSTDIRTSWAPEDLIEQPEPTTSSSH 617
>UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplasmic
component-like; n=1; Delftia acidovorans SPH-1|Rep:
ABC-type Fe3+ transport system periplasmic
component-like - Delftia acidovorans SPH-1
Length = 674
Score = 32.7 bits (71), Expect = 3.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 396 WMWTRSLRSRWKSSPWMTASAHRATSETTWASTHRRPAPRWSTATS 259
W + S R RW SP + SA A + W + R PR+ T+
Sbjct: 217 WRYAPSARHRWPGSPCLRTSAWSALTGLPWPAISRLRWPRFPNPTT 262
>UniRef50_UPI00006609DD Cluster: UPI00006609DD related cluster; n=1;
Takifugu rubripes|Rep: UPI00006609DD UniRef100 entry -
Takifugu rubripes
Length = 150
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 402 RYWMWTRSLRSRWKSSPWMTASAHRATSETTWASTHRRPAPRWST 268
R+ W S R+ +PW +++ HR T W+S HRR AP WS+
Sbjct: 7 RFAPWWSSNHRRF--APWWSSN-HRRFG-TWWSSNHRRFAPWWSS 47
Score = 31.5 bits (68), Expect = 8.7
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = -3
Query: 435 TWRMCTTRLNGRYWMWTRSLRSRWKSSPWMTASAHRATSETTWASTHRRPAPRWST 268
TW R G +W W W +S HR T W+S HRR AP WS+
Sbjct: 54 TWWSSNDRRFGPWWSSNHRRFGTW----W--SSNHRRFG-TWWSSNHRRFAPLWSS 102
>UniRef50_Q9F5H1 Cluster: Riorf21 protein; n=1; Agrobacterium
rhizogenes|Rep: Riorf21 protein - Agrobacterium
rhizogenes
Length = 58
Score = 32.3 bits (70), Expect = 5.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -3
Query: 435 TWRMCTTRLNGRYWMWTRSLRSRWKSSPWMTASAHRATSETTWASTHRRPAP 280
+WR +TR W+ + R W+ W+T A+ E ST RR P
Sbjct: 3 SWRSKSTRSTMPLWLTLHNRRCAWRGVAWVTTD-ELASQEGATQSTGRRATP 53
>UniRef50_A3U676 Cluster: Putative uncharacterized protein; n=1;
Croceibacter atlanticus HTCC2559|Rep: Putative
uncharacterized protein - Croceibacter atlanticus
HTCC2559
Length = 1070
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -1
Query: 194 RVLHHGNH----DLVGLPSLAGSWKQEQVKIIYYDVNCVPGSNIA 72
RVLH+GN+ D + PS + + ++I + ++ C P SNIA
Sbjct: 167 RVLHYGNNFTNPDPISPPSGTRDYYRPNIEIDFNEITCFPPSNIA 211
>UniRef50_Q2VMT1 Cluster: Phenylalanine ammonia lyase; n=1;
Rhodotorula glutinis|Rep: Phenylalanine ammonia lyase -
Rhodotorula glutinis (Yeast)
Length = 714
Score = 31.9 bits (69), Expect = 6.6
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 384 RSLRSRWKSSPWMTASAHRATSETTWASTHRRPAPRWSTATS 259
R+ SR S P TAS R+T W+S+ R+ RWS S
Sbjct: 459 RTTSSRSSSPPTSTASCRRSTC-ARWSSSTRKSLSRWSPTCS 499
>UniRef50_Q3UI92 Cluster: 17 days embryo heart cDNA, RIKEN
full-length enriched library, clone:I920088N03
product:hypothetical Alanine-rich region profile
containing protein, full insert sequence; n=4; Mus
musculus|Rep: 17 days embryo heart cDNA, RIKEN
full-length enriched library, clone:I920088N03
product:hypothetical Alanine-rich region profile
containing protein, full insert sequence - Mus musculus
(Mouse)
Length = 177
Score = 31.5 bits (68), Expect = 8.7
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 441 ATTWRMCTTRLNGRYWMW--TRSLRSRWKSSPWMTASAHRATSETTWASTHRRPAP 280
A T + GR W + TR L+++W + S HR +T + TH PAP
Sbjct: 51 AATTHTALSAETGRAWNFCTTRGLQTQWLCLDYPRVSQHRGQDDTQ-SGTHAGPAP 105
>UniRef50_Q09A80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 473
Score = 31.5 bits (68), Expect = 8.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -3
Query: 420 TTRLNGRYWMWTRSLRSRWKSSPWM--TASAHRATSETT--WASTHRRPAPR-WSTAT 262
T R++G ++ + W S PWM T R++ T W T PAPR W +T
Sbjct: 320 TRRMSGAASTTASAVSALWPSKPWMAFTPPDSRSSVSTAVCWPETMSAPAPRAWMAST 377
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,001,261
Number of Sequences: 1657284
Number of extensions: 6518064
Number of successful extensions: 18923
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18908
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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