Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0023X.Seq
(452 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 2.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 2.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 3.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 6.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 8.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 8.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 240 DGVDLHERSRWTT*GRAAYVWRPTWFRRW 326
DG++ RW G A VW +F W
Sbjct: 197 DGIENIGSIRWELAGTLAVVWIMCYFCIW 225
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 240 DGVDLHERSRWTT*GRAAYVWRPTWFRRW 326
DG++ RW G A VW +F W
Sbjct: 250 DGIENIGSIRWELAGTLAVVWIMCYFCIW 278
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 3.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 268 RDLSCKSTPSTYIE 227
R +SC +TP ++IE
Sbjct: 656 RPISCHTTPDSFIE 669
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 34 FCDCLSLSLYSFYAILD 84
+C+ SLS+ F A+LD
Sbjct: 540 YCNLFSLSVDHFNAVLD 556
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 34 FCDCLSLSLYSFYAILD 84
+C+ SLS+ F A+LD
Sbjct: 508 YCNLFSLSVDHFNAVLD 524
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 155 PSLAGSWKQEQVKIIYYD 102
P+L WK E+++ IY +
Sbjct: 489 PNLLEGWKVEKIQEIYLE 506
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 124 IHRDLPGKSTTTT 136
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 124 IHRDLPGKSTTTT 136
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 124 IHRDLPGKSTTTT 136
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 124 IHRDLPGKSTTTT 136
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 140 IHRDLPGKSTTTT 152
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 274 VHRDLSCKSTPST 236
+HRDL KST +T
Sbjct: 135 IHRDLPGKSTTTT 147
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,707
Number of Sequences: 438
Number of extensions: 1960
Number of successful extensions: 30
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -