Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0021.Seq
         (783 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p pro...    29   7.2  
AY061234-1|AAL28782.1|  547|Drosophila melanogaster LD17594p pro...    29   7.2  
AE013599-3356|AAF46817.3|  631|Drosophila melanogaster CG5625-PB...    29   7.2  
AE013599-3355|AAF46816.3|  612|Drosophila melanogaster CG5625-PA...    29   7.2  

>BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p
           protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 333 FMNILLNIIPF*CFCPVQPVIDYQQDKTLFVYLMID 226
           F N  L II    FCP+    DY   K+L +YL+++
Sbjct: 447 FYNNALTIIQLQNFCPLLEKFDYTSRKSLALYLVMN 482


>AY061234-1|AAL28782.1|  547|Drosophila melanogaster LD17594p
           protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 333 FMNILLNIIPF*CFCPVQPVIDYQQDKTLFVYLMID 226
           F N  L II    FCP+    DY   K+L +YL+++
Sbjct: 153 FYNNALTIIQLQNFCPLLEKFDYTSRKSLALYLVMN 188


>AE013599-3356|AAF46817.3|  631|Drosophila melanogaster CG5625-PB,
           isoform B protein.
          Length = 631

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 333 FMNILLNIIPF*CFCPVQPVIDYQQDKTLFVYLMID 226
           F N  L II    FCP+    DY   K+L +YL+++
Sbjct: 428 FYNNALTIIQLQNFCPLLEKFDYTSRKSLALYLVMN 463


>AE013599-3355|AAF46816.3|  612|Drosophila melanogaster CG5625-PA,
           isoform A protein.
          Length = 612

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 333 FMNILLNIIPF*CFCPVQPVIDYQQDKTLFVYLMID 226
           F N  L II    FCP+    DY   K+L +YL+++
Sbjct: 409 FYNNALTIIQLQNFCPLLEKFDYTSRKSLALYLVMN 444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,401,747
Number of Sequences: 53049
Number of extensions: 505823
Number of successful extensions: 664
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)