Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0021.Seq
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.8  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 9   FKFHLHFNHLSIVVESG 59
           F FHL FN   I+V++G
Sbjct: 215 FPFHLMFNRDLIIVQTG 231


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 9   FKFHLHFNHLSIVVESG 59
           F FHL FN   I+V++G
Sbjct: 215 FPFHLMFNRDLIIVQTG 231


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 211 LESFRINHQINKQSFVLLIINNWLDRTKTSEWNY 312
           LES R  ++ +K   +   +  W  +  T+ W+Y
Sbjct: 141 LESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDY 174


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 211 LESFRINHQINKQSFVLLIINNWLDRTKTSEWNY 312
           LES R  ++ +K   +   +  W  +  T+ W+Y
Sbjct: 156 LESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDY 189


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 211 LESFRINHQINKQSFVLLIINNWLDRTKTSEWNY 312
           LES R  ++ +K   +   +  W  +  T+ W+Y
Sbjct: 44  LESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDY 77


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -1

Query: 396 RSNLHVILNQ--RS*LDLNFKM*FMNILLN 313
           RSNLHVI+N        LN +   +N+L+N
Sbjct: 276 RSNLHVIVNATVTKVRTLNKRATGVNVLIN 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,515
Number of Sequences: 438
Number of extensions: 3724
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)