Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0020X.Seq
(534 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 132 2e-33
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 132 2e-33
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 123 9e-31
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 121 5e-30
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 24 0.73
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.2
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 5.2
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 6.8
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 132 bits (318), Expect = 2e-33
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 129 bits (312), Expect = 1e-32
Identities = 62/68 (91%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQR IFAG+QLEDGRTLS+YN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 441 IQKESTLH 448
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 123 bits (297), Expect = 9e-31
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 192 IQKE 203
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 121 bits (291), Expect = 5e-30
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQR IFAG+QLEDGRTLS+YN
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 192 IQKE 203
IQKE
Sbjct: 109 IQKE 112
Score = 80.2 bits (189), Expect = 1e-17
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +3
Query: 99 IQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQKESTLH 215
IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YNIQKESTLH
Sbjct: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 40
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 24.2 bits (50), Expect = 0.73
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 208 VDSFWILYSERVRPSSSCSPAKI 140
+DSF + Y +RVRP+ P ++
Sbjct: 45 LDSFSVSYDKRVRPNYGGPPVEV 67
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 237 HHEASTPGGGWIPSGYCTPR 178
HH P GG P G PR
Sbjct: 63 HHYGGPPSGGQPPQGMPYPR 82
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 31 PSREKPSPLRSS 66
P RE PSP RSS
Sbjct: 73 PKREIPSPKRSS 84
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.0 bits (42), Expect = 6.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 32 PHGKNHHP*GRAVRYHRECESYNSRQRGNPSQSTAV 139
P K HHP + V YH N R R + S ST +
Sbjct: 38 PSDKLHHPIHQTVIYHNNPRDPN-RAR-SVSYSTVI 71
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,723
Number of Sequences: 336
Number of extensions: 2365
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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