Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0020X.Seq
(534 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 126 9e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 126 9e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 126 9e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 126 9e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 126 9e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 126 9e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 126 9e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 126 9e-30
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 126 9e-30
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 126 9e-30
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 126 9e-30
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 126 9e-30
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 126 9e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 126 9e-30
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 126 9e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 126 9e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 126 9e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 126 9e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 126 9e-30
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 126 9e-30
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 125 2e-29
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 124 3e-29
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 118 2e-27
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 103 7e-23
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 78 3e-15
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 63 1e-10
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 59 2e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 54 6e-08
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 53 1e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 7e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 1e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 48 3e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 48 3e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 48 4e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 47 7e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 47 7e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 47 7e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 47 7e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 44 6e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 42 3e-04
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 42 3e-04
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 42 3e-04
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 42 3e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 41 5e-04
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 41 6e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 40 8e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 40 8e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 0.001
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 39 0.002
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 39 0.002
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 38 0.004
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 37 0.010
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 36 0.017
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 35 0.039
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 34 0.052
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 34 0.052
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 34 0.069
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 34 0.069
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 34 0.069
At1g11970.1 68414.m01383 hypothetical protein 33 0.16
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 31 0.48
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 30 1.1
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 29 2.6
At4g36240.1 68417.m05155 zinc finger (GATA type) family protein ... 29 2.6
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 4.5
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 28 4.5
At5g12280.1 68418.m01444 hypothetical protein 27 5.9
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 27 5.9
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 27 5.9
At2g28380.1 68415.m03449 double-stranded RNA-binding domain (DsR... 27 5.9
At1g73180.1 68414.m08469 eukaryotic translation initiation facto... 27 7.9
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 365 IQKESTLH 372
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 91 KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
K + + K L +S S LESS +MDV +T SRR+ TW FVV ++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 91 KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
K + + K L +S S LESS +MDV +T SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 91 KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
K + + K L +S S LESS +MDV +T SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 91 KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
K + + K L +S S LESS +MDV +T SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 91 KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
K + + K L +S S LESS +MDV +T SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 289 IQKESTLH 296
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +2
Query: 251 QEKLYSTPXXXXXXXXXXXXXXXRFYKVDENGKIHRLXRDWTGEQCGAGVFMAVMEDRHY 430
++K Y+ P +FYK+D +GK+ RL ++ CGAG FMA DRHY
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHY 140
Query: 431 CGKCHSTLVFNDD 469
CGKC T V+ +
Sbjct: 141 CGKCGLTYVYQKE 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +2
Query: 251 QEKLYSTPXXXXXXXXXXXXXXXRFYKVDENGKIHRLXRDWTGEQCGAGVFMAVMEDRHY 430
++K Y+ P +FYKVD +GK+ RL ++ CGAG FMA DRHY
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHY 140
Query: 431 CGKCHSTLVFNDD 469
CGKC T V+ +
Sbjct: 141 CGKCGLTYVYQKE 153
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 84.2 bits (199), Expect = 5e-17
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
I VKTLTGK I +++EP+DTI+ +K +++KEGIPP QQRLI+AG+QL D +T +Y I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 198 KESTLH 215
S LH
Sbjct: 139 GGSVLH 144
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 123 bits (296), Expect = 9e-29
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE IPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 212 IQKESTLH 219
Score = 119 bits (286), Expect = 1e-27
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++ N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 136 IQKESTLH 143
Score = 92.7 bits (220), Expect = 1e-19
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG 170
M IFVKTLTGKTITLEVE S TI+NVKA IQDKEGIPP+QQRLIFAG+QLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 87.4 bits (207), Expect = 5e-18
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
I VKTLTGK I +++EP+DTI+ +K +++KEGIPP QQRLI+AG+QL D +T +YNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 198 KESTLH 215
S LH
Sbjct: 139 GGSVLH 144
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 126 bits (304), Expect = 9e-30
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 66.1 bits (154), Expect = 1e-11
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = +2
Query: 251 QEKLYSTPXXXXXXXXXXXXXXXRFYKVDENGKIHRLXRDWTGEQCGAGVFMAVMEDRHY 430
++K Y+ P +FYKVD +GK+ RL ++ CG G FMA DRHY
Sbjct: 81 KKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHY 140
Query: 431 CGKCHSTLVFNDDDK 475
CGKC +T VF D+
Sbjct: 141 CGKCGTTYVFKKADE 155
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 125 bits (301), Expect = 2e-29
Identities = 59/68 (86%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+N+KA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 120 bits (289), Expect = 6e-28
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGI P+QQRLIFAG+Q EDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 2e-25
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IF+KTLTGKT LEVE SDTI+NVKA IQD EGIPP+Q RLIFAG+QLEDGRTL++YN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 192 IQKESTLH 215
+Q++STLH
Sbjct: 61 VQEDSTLH 68
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 124 bits (300), Expect = 3e-29
Identities = 58/68 (85%), Positives = 65/68 (95%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEG+PP+QQRLIFAG+QL+DGRTL++YN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 139 IQKESTLH 146
Score = 118 bits (283), Expect = 3e-27
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFV+TLT KTI LEVE SDT +NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 215 IQKESTLH 222
Score = 112 bits (269), Expect = 2e-25
Identities = 57/69 (82%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG-RTLSEY 188
M IFV TLTGKTITLEVE SDTI+NVKA IQDKE I P+QQRLIFAGEQLEDG TL++Y
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 189 NIQKESTLH 215
NIQKESTLH
Sbjct: 291 NIQKESTLH 299
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +3
Query: 6 VKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
+ M I KTLT KTIT++V SDTI NVKA IQD EGIP +QQRLIF+G+ L+DGRTL++
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 186 YNIQKESTLH 215
Y+IQK+S LH
Sbjct: 61 YSIQKDSILH 70
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 118 bits (285), Expect = 2e-27
Identities = 57/68 (83%), Positives = 63/68 (92%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFV+TLTGKTITLEV+ SDTI+NVKA IQDKEGI P QQRLIFAG+QLEDGRTL++YN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 192 IQKESTLH 215
IQKESTLH
Sbjct: 139 IQKESTLH 146
Score = 106 bits (254), Expect = 1e-23
Identities = 51/66 (77%), Positives = 59/66 (89%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
I+ KTLT KTITL+VE SD+I NVKA IQ+KEGIP +QQRLIFAG+QLEDG TL++YNIQ
Sbjct: 5 IYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQ 64
Query: 198 KESTLH 215
KESTLH
Sbjct: 65 KESTLH 70
Score = 98.3 bits (234), Expect = 3e-21
Identities = 51/73 (69%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 RVKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGI--PPNQQRLIFAGEQLEDGRT 176
R M IFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF G++L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 177 LSEYNIQKESTLH 215
L++Y+IQKESTLH
Sbjct: 376 LADYSIQKESTLH 388
Score = 97.5 bits (232), Expect = 5e-21
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IF+KTLTGKTI LEVE SDTI NVK IQ KEGI P+QQ LIF G+QLEDG TL +Y+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 192 IQKESTLH 215
I K+STL+
Sbjct: 612 IHKKSTLY 619
Score = 93.9 bits (223), Expect = 6e-20
Identities = 46/68 (67%), Positives = 53/68 (77%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IFVK GK ITLEV SDTI++VKA IQDK G PP+QQ L+F G QL+DGRTL +YN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 192 IQKESTLH 215
I+ ESTLH
Sbjct: 453 IRNESTLH 460
Score = 85.8 bits (203), Expect = 2e-17
Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
Frame = +3
Query: 3 RVKMXIFVKTL-----TGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
R M IFVK L TG+ LEVE SDTI+NVKA +QDKE IP + RLIFAG+ LE
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294
Query: 168 GRTLSEYNIQKESTLH 215
GRTL+ YNIQK STL+
Sbjct: 295 GRTLAHYNIQKGSTLY 310
Score = 83.8 bits (198), Expect = 6e-17
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
Frame = +3
Query: 12 MXIFVKTLTGK-----TITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQL--EDG 170
M IFV T +GK T+TL+VE SDTIENVKA IQD+EG+ P+ QRLIF GE+L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 171 RTLSEYNIQKESTL 212
RTL++Y I+ STL
Sbjct: 215 RTLADYGIRNRSTL 228
Score = 81.4 bits (192), Expect = 3e-16
Identities = 46/75 (61%), Positives = 51/75 (68%), Gaps = 7/75 (9%)
Frame = +3
Query: 12 MXIFVKTL-------TGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG 170
M IFVKT T KTITLEVE SDTI+NVK IQ K GIP ++QRLIF G L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 171 RTLSEYNIQKESTLH 215
RTL +YNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 103 bits (247), Expect = 7e-23
Identities = 48/68 (70%), Positives = 57/68 (83%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M IF+KTLTG+ I LEVE DTIEN+KA IQDK+GIP +QQRLIF G+QLEDG TL++YN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 192 IQKESTLH 215
IQ +S LH
Sbjct: 146 IQNDSILH 153
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 78.2 bits (184), Expect = 3e-15
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M I VKTLT K I +E+E +DTIE +K I++KEGIPP QR+++ G+QL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 192 IQKESTLH 215
+++ S LH
Sbjct: 61 LERGSVLH 68
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAG 152
M IF+KTLTG+T T EV+ SDTI +KA ++KEGIP QQRLIF G
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQG 96
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 6 VKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
V M IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+S+
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 186 YNIQKESTL 212
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVK 92
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQKE 203
+KTL +T T +V ++T+ K I + G+P QQRLIF G L+D LSEY+++
Sbjct: 28 IKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENG 87
Query: 204 STLH 215
TLH
Sbjct: 88 HTLH 91
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 54.0 bits (124), Expect = 6e-08
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG--IPPNQQRLIFAGEQLEDGRTLSE 185
M IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI G+ L+D TL E
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 186 YNIQKES 206
N+ + S
Sbjct: 61 NNVVENS 67
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/69 (36%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 KMXIFVKTLTG-KTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
++ IFV+ ++G KTI + E DT+E + I+ K IP +QR+I+ G+QL+ +L+
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 186 YNIQKESTL 212
Y+I+++++L
Sbjct: 154 YSIEQDASL 162
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.4 bits (115), Expect = 7e-07
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 6 VKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
V + + V+ G ++ T+E+ K I +P NQQRLI+ G L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 186 YNIQKESTLH 215
Y +Q + T+H
Sbjct: 76 YGLQADHTVH 85
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQKE 203
++ G +++ T+E+ K + +P NQQRLI+ G L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 204 STLH 215
T+H
Sbjct: 82 HTIH 85
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
M IFVKTL G +EV+P D++ +VK I+ +G P +Q LI G+ L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 183 EYNIQKES 206
E + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
M IFVKTL G +EV+P D++ +VK I+ +G P +Q LI G+ L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 183 EYNIQKES 206
E + + S
Sbjct: 61 ENKVAENS 68
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/67 (32%), Positives = 40/67 (59%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 192 IQKESTL 212
++ + L
Sbjct: 61 VKDDDLL 67
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
M + VKTL G + V PSDTI VK I+D +G P QQ LI G+ L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 EYNIQKESTL 212
E + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
M + VKTL G + V PSDTI VK I+D +G P QQ LI G+ L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 EYNIQKESTL 212
E + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
M + VKTL G + V PSDTI VK I+D +G P QQ LI G+ L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 EYNIQKESTL 212
E + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQD---KEGIPPNQQRLIFAGEQLEDGRTLS 182
M + VKTL G + V P+DTI VK I+D K+ P QQ LI G+ L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 183 EYNIQKESTL 212
E + +E L
Sbjct: 61 ENKVTEEGFL 70
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M +++ T TG + ++ ++ +T+ +K I+ +GIP ++Q L G+ LED +Y
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 192 IQKESTL 212
I ES L
Sbjct: 61 ILFESRL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M + V+ +G T ++++ DT+ K I+ + IP ++Q + F G+ LED + E++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 192 IQKESTLH 215
I + LH
Sbjct: 61 ILQNPLLH 68
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M + + T TG + ++ ++ +T+ +K I+ +GIP ++Q L G+ LED +Y
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 192 IQKESTL 212
I ES L
Sbjct: 61 ILFESLL 67
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKATIQDKEG--IPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
VKT GK VE I VK I K G + P++Q +++ GE+LED +++
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 198 KESTLH 215
+S LH
Sbjct: 175 DDSVLH 180
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKATIQDKEG--IPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
VKT GK VE I VK I K G + P++Q +++ GE+LED +++
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 198 KESTLH 215
+S LH
Sbjct: 175 DDSVLH 180
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
M I VKTL G +EV+P+D++ VK I+ G P QQ LI E+L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 183 EYNIQKESTL 212
+ +S +
Sbjct: 61 ANKVFDKSVI 70
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQ-RLIFAGEQLEDGRTLSEYNI 194
I +K L T TL VE + + ++K I G+ P +Q RL+F G L++ + LS+Y++
Sbjct: 13 IKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHV 72
Query: 195 QKESTLH 215
++ TL+
Sbjct: 73 EEGHTLY 79
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
M +F +T +G T +E+ DT+ +K I+ + IP ++Q L+F G L+D + +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 192 IQKESTL 212
I S +
Sbjct: 61 ILNHSRI 67
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVE-PSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
+ FV+ L GK++TL P E +K I ++ IP + QRLI G Q+ DG +S+
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAISQ 67
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 39 GKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNI 194
GK+I L V P T++++K+ +Q + P Q+LIF G+ L + TL + ++
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDV 595
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPP 125
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVK 92
M I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 RVKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQ-RLIFAGEQLEDGRTL 179
R M I VK+L GK L V +++ +++A K + ++ + G++L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 180 SEYNIQKESTLH 215
+ N+Q S +H
Sbjct: 718 AAQNVQPNSLVH 729
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQ-RLIFAGEQLEDGRTLSEY 188
M I + L GK L V +++ ++KA K + ++ + G++LED ++L+E
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 189 NIQKESTLH 215
N+Q S +H
Sbjct: 560 NVQPNSLVH 568
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 36.7 bits (81), Expect = 0.010
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKE---GIPPNQQRLIFAGEQLEDGRTLSEY 188
I V+T+ GK L VE S + VK I KE GIP + + L GE+L+D R +++
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 189 NIQKESTLH 215
++ +H
Sbjct: 170 CQNGDNVIH 178
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
M +F +T +G +E+ DT+ +K I+ + IP ++Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 34.7 bits (76), Expect = 0.039
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGE---QLEDGRTLS 182
M +F+ GK +EVE + TI ++K I D G+ Q L G+ ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 183 EYNIQKESTLH 215
+Y I+ H
Sbjct: 61 DYKIKACDIFH 71
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 34.3 bits (75), Expect = 0.052
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
+ ++ +G + T++V DT+ +K I+ +G P ++Q LIF + L+D + I+
Sbjct: 4 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63
Query: 198 KESTL 212
S +
Sbjct: 64 HNSRI 68
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 34.3 bits (75), Expect = 0.052
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +3
Query: 18 IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
+ ++ +G + T++V DT+ +K I+ +G P ++Q LIF + L+D + I+
Sbjct: 38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 97
Query: 198 KESTL 212
S +
Sbjct: 98 HNSRI 102
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 33.9 bits (74), Expect = 0.069
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 54 LEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
L +E + T +K + G+ P QQRL+F G++ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 33.9 bits (74), Expect = 0.069
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAG 152
M V+ L G + +EVE +DT+ VK I+ + +P ++Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 33.9 bits (74), Expect = 0.069
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAG 152
M V+ L G + LEV+ DT+ VK I+ + IP ++Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 3 RVKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIP 122
R + + + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
V T++ + + ++ + T +K I GI +QRL+F G++ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVKATI-QDKEGIPP-NQQRLIFAGEQLEDGRTLSE 185
+ + V T GK V+ + +K I ++ +G P + Q ++F GE+L+D R +
Sbjct: 111 LLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDG 170
Query: 186 YNIQKESTLH 215
S +H
Sbjct: 171 ICKDGNSVIH 180
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 33 LTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG 170
+TG T E DTI K T++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At4g36240.1 68417.m05155 zinc finger (GATA type) family protein
NTL1 protein, curled-leaved tobacco, PIR2:S46419
Length = 238
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 403 HGGDGGPSLLREVSQHAGLQRRRQITKAPLACKKRCDCC 519
+GG LR H G+Q+ Q PL K C+ C
Sbjct: 153 YGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNAC 191
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 200 LLDIVLREGTSIFQLLSSKDQPLLIGRDSLFVL 102
LLD +R GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 69 SDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNI 194
S+ + ++K I + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 42 KTITLEVEP-SDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNI 194
K + + V+ S+ + ++K I + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 251 AFLSATTKPQRQVEGGF--LLDIVLREGTSIFQLLSSKDQPLLIGRDSLFVL 102
A + A + + VEG LD +R GT +F+ L+ + +GR SLF L
Sbjct: 264 ATIVALEEVVKAVEGRIPVFLDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 200 LLDIVLREGTSIFQLLSSKDQPLLIGRDSLFVL 102
LLD +R GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At2g28380.1 68415.m03449 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 434
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 28 RPSREKPSPLRSSRQIPSRM*KLQFKTKRESLPINSG 138
RP+ +PSP +SR +P K ++ R SL SG
Sbjct: 213 RPTSPQPSPATTSRILPFICPKQPSRSSRSSLAATSG 249
>At1g73180.1 68414.m08469 eukaryotic translation initiation
factor-related similar to eukaryotic translation
initiation factor 2A (GI:21956484) [Homo sapiens];
similar to Eukaryotic translation initiation factor 3
subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
(Swiss-Prot:P55884) [Homo sapiens]
Length = 513
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 269 WSKASLAFLSATTKPQRQVEGG 204
WS FL+A+T P+RQ++ G
Sbjct: 364 WSPDGRYFLTASTAPRRQIDNG 385
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,513,163
Number of Sequences: 28952
Number of extensions: 233720
Number of successful extensions: 813
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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