Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0014.Seq
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL162578-2|CAI40012.1| 331|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL049820-3|CAI42306.1| 331|Homo sapiens RP11-419L10.1 protein. 31 2.6
AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein. 31 2.6
AK074180-1|BAB85006.1| 349|Homo sapiens FLJ00253 protein protein. 31 2.6
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 2.6
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 31 2.6
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 31 2.6
L13857-1|AAA35913.1| 1333|Homo sapiens guanine nucleotide exchan... 31 4.5
BC033182-1|AAH33182.1| 246|Homo sapiens transmembrane and ubiqu... 31 4.5
BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal... 31 4.5
BC000936-1|AAH00936.1| 246|Homo sapiens TMUB1 protein protein. 31 4.5
AY603380-1|AAU00156.1| 246|Homo sapiens hepatocyte odd protein ... 31 4.5
AY358481-1|AAQ88845.1| 246|Homo sapiens TLIE763 protein. 31 4.5
AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein. 31 4.5
AC019171-1|AAX93186.1| 1304|Homo sapiens unknown protein. 31 4.5
AB209140-1|BAD92377.1| 988|Homo sapiens son of sevenless homolo... 31 4.5
AK124611-1|BAC85899.1| 461|Homo sapiens protein ( Homo sapiens ... 30 7.9
AB058778-1|BAB47504.1| 922|Homo sapiens KIAA1875 protein protein. 30 7.9
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 216 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 272
>AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 134 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 190
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 216 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 272
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 216 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 272
>AL162578-2|CAI40012.1| 331|Homo sapiens RP11-419L10.1 protein.
Length = 331
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 81 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 137
>AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 134 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 190
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 216 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 272
>AL049820-3|CAI42306.1| 331|Homo sapiens RP11-419L10.1 protein.
Length = 331
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 81 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 137
>AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 134 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 190
>AK074180-1|BAB85006.1| 349|Homo sapiens FLJ00253 protein protein.
Length = 349
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 95 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 151
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA2 protein.
Length = 2165
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 641 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 697
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 216 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 272
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 420 SPHRSA-PAMRSLSYCRAPHSRVSLRAAPDSPARVPGS-----PPGRSGEEKFHSRL 572
SPH S+ P S S +P R+ P SPA +PGS PPG E H L
Sbjct: 433 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 489
>L13857-1|AAA35913.1| 1333|Homo sapiens guanine nucleotide exchange
factor protein.
Length = 1333
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 447 RSLSYCRAPHSRV-SLRAAPDSPARVPGSPPGRSG 548
R +SY R P S S +AP+SP R P +PP SG
Sbjct: 1061 RKISYSRIPESETESTASAPNSP-RTPLTPPPASG 1094
>BC033182-1|AAH33182.1| 246|Homo sapiens transmembrane and
ubiquitin-like domain containing 1 protein.
Length = 246
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 474 HSRVSLRAAPDSPARVPGSPPGRSGEE 554
H VS R P +P PGS PG SG E
Sbjct: 168 HCHVSTRVGPPNPPCPPGSEPGPSGLE 194
>BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal
protein S18C protein.
Length = 142
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -3
Query: 193 PLRRNKICSRKLTLRSIMILIFF---FTECLYFRKISGFC 83
PL++ +C + + +++ +L F FT C+Y R I+G C
Sbjct: 61 PLKKCILCGKHVDYKNVQLLSQFVSPFTGCIYGRHITGLC 100
>BC000936-1|AAH00936.1| 246|Homo sapiens TMUB1 protein protein.
Length = 246
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 474 HSRVSLRAAPDSPARVPGSPPGRSGEE 554
H VS R P +P PGS PG SG E
Sbjct: 168 HCHVSTRVGPPNPPCPPGSEPGPSGLE 194
>AY603380-1|AAU00156.1| 246|Homo sapiens hepatocyte odd protein
shuttling protein protein.
Length = 246
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 474 HSRVSLRAAPDSPARVPGSPPGRSGEE 554
H VS R P +P PGS PG SG E
Sbjct: 168 HCHVSTRVGPPNPPCPPGSEPGPSGLE 194
>AY358481-1|AAQ88845.1| 246|Homo sapiens TLIE763 protein.
Length = 246
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 474 HSRVSLRAAPDSPARVPGSPPGRSGEE 554
H VS R P +P PGS PG SG E
Sbjct: 168 HCHVSTRVGPPNPPCPPGSEPGPSGLE 194
>AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein.
Length = 142
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -3
Query: 193 PLRRNKICSRKLTLRSIMILIFF---FTECLYFRKISGFC 83
PL++ +C + + +++ +L F FT C+Y R I+G C
Sbjct: 61 PLKKCILCGKHVDYKNVQLLSQFVSPFTGCIYGRHITGLC 100
>AC019171-1|AAX93186.1| 1304|Homo sapiens unknown protein.
Length = 1304
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 447 RSLSYCRAPHSRV-SLRAAPDSPARVPGSPPGRSG 548
R +SY R P S S +AP+SP R P +PP SG
Sbjct: 1032 RKISYSRIPESETESTASAPNSP-RTPLTPPPASG 1065
>AB209140-1|BAD92377.1| 988|Homo sapiens son of sevenless homolog 1
variant protein.
Length = 988
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 447 RSLSYCRAPHSRV-SLRAAPDSPARVPGSPPGRSG 548
R +SY R P S S +AP+SP R P +PP SG
Sbjct: 731 RKISYSRIPESETESTASAPNSP-RTPLTPPPASG 764
>AK124611-1|BAC85899.1| 461|Homo sapiens protein ( Homo sapiens
cDNA FLJ42620 fis, clone BRACE3015121. ).
Length = 461
Score = 29.9 bits (64), Expect = 7.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 456 SYCRAPHSRVSLRAAPDSPARVPGSPPGRSGEEKFHSRLVE 578
S+C P +R+ P PA++PG PP + HS+L++
Sbjct: 283 SFCLEPEARLH----PAGPAQLPGEPPPLEETDWSHSQLLD 319
>AB058778-1|BAB47504.1| 922|Homo sapiens KIAA1875 protein protein.
Length = 922
Score = 29.9 bits (64), Expect = 7.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 456 SYCRAPHSRVSLRAAPDSPARVPGSPPGRSGEEKFHSRLVE 578
S+C P +R+ P PA++PG PP + HS+L++
Sbjct: 744 SFCLEPEARLH----PAGPAQLPGEPPPLEETDWSHSQLLD 780
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,418,728
Number of Sequences: 237096
Number of extensions: 1602866
Number of successful extensions: 6571
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6567
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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