BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0014.Seq
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122241-1|AAM52753.1| 1174|Drosophila melanogaster SD02148p pro... 31 1.7
AE014298-2581|AAF48737.1| 1105|Drosophila melanogaster CG8465-PC... 31 1.7
AE014298-2580|AAF48736.1| 1169|Drosophila melanogaster CG8465-PB... 31 1.7
AE014298-2579|AAF48735.1| 1169|Drosophila melanogaster CG8465-PA... 31 1.7
U82273-1|AAC47427.1| 770|Drosophila melanogaster FGF homolog pr... 29 5.3
BT003790-1|AAO41473.1| 760|Drosophila melanogaster GH08887p pro... 29 5.3
AE014297-2709|AAF55701.1| 770|Drosophila melanogaster CG4608-PA... 29 5.3
X57484-1|CAA40722.1| 264|Drosophila melanogaster tra-2 protein. 29 7.0
M76381-1|AAA69686.1| 136|Drosophila melanogaster transformer-2 ... 29 7.0
M30939-3|AAA28955.1| 226|Drosophila melanogaster transformer-2 ... 29 7.0
M30939-2|AAA28957.1| 136|Drosophila melanogaster transformer-2 ... 29 7.0
M30939-1|AAA28954.1| 264|Drosophila melanogaster transformer-2 ... 29 7.0
M23633-1|AAA28953.1| 264|Drosophila melanogaster protein ( D.me... 29 7.0
J03155-1|AAA62771.1| 256|Drosophila melanogaster transformer-2 ... 29 7.0
AY128417-1|AAM75010.1| 658|Drosophila melanogaster GH09410p pro... 29 7.0
AY058768-1|AAL13997.1| 264|Drosophila melanogaster SD04329p pro... 29 7.0
AF216664-1|AAF23815.1| 1184|Drosophila melanogaster xmas-2 protein. 29 7.0
AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-P... 29 7.0
AE013599-1918|AAM68560.1| 136|Drosophila melanogaster CG10128-P... 29 7.0
AE013599-1916|AAM68558.1| 226|Drosophila melanogaster CG10128-P... 29 7.0
AE013599-1915|AAM68557.1| 226|Drosophila melanogaster CG10128-P... 29 7.0
AE013599-1914|AAS64911.1| 264|Drosophila melanogaster CG10128-P... 29 7.0
AE013599-1913|AAS64910.1| 264|Drosophila melanogaster CG10128-P... 29 7.0
AE013599-1912|AAF58232.2| 264|Drosophila melanogaster CG10128-P... 29 7.0
BT025085-1|ABE73256.1| 736|Drosophila melanogaster IP14110p pro... 28 9.2
AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-P... 28 9.2
>AY122241-1|AAM52753.1| 1174|Drosophila melanogaster SD02148p protein.
Length = 1174
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 392 GPSDRDSDIFRTLPPTLNPAFSADSEARRDL 300
G S D + FRT P +L+P S D E R +L
Sbjct: 961 GSSSEDEENFRTPPQSLSPGISMDLEPRYEL 991
>AE014298-2581|AAF48737.1| 1105|Drosophila melanogaster CG8465-PC,
isoform C protein.
Length = 1105
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 392 GPSDRDSDIFRTLPPTLNPAFSADSEARRDL 300
G S D + FRT P +L+P S D E R +L
Sbjct: 897 GSSSEDEENFRTPPQSLSPGISMDLEPRYEL 927
>AE014298-2580|AAF48736.1| 1169|Drosophila melanogaster CG8465-PB,
isoform B protein.
Length = 1169
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 392 GPSDRDSDIFRTLPPTLNPAFSADSEARRDL 300
G S D + FRT P +L+P S D E R +L
Sbjct: 961 GSSSEDEENFRTPPQSLSPGISMDLEPRYEL 991
>AE014298-2579|AAF48735.1| 1169|Drosophila melanogaster CG8465-PA,
isoform A protein.
Length = 1169
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 392 GPSDRDSDIFRTLPPTLNPAFSADSEARRDL 300
G S D + FRT P +L+P S D E R +L
Sbjct: 961 GSSSEDEENFRTPPQSLSPGISMDLEPRYEL 991
>U82273-1|AAC47427.1| 770|Drosophila melanogaster FGF homolog
protein.
Length = 770
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 353 AGCGKYRSHGPKARRCHHDRQAQSSPQRS 439
AG G R GPKA+RC R+ ++ +R+
Sbjct: 538 AGAGALRKLGPKAKRCKELREKAAAEKRA 566
>BT003790-1|AAO41473.1| 760|Drosophila melanogaster GH08887p
protein.
Length = 760
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 353 AGCGKYRSHGPKARRCHHDRQAQSSPQRS 439
AG G R GPKA+RC R+ ++ +R+
Sbjct: 538 AGAGALRKLGPKAKRCKELREKAAAEKRA 566
>AE014297-2709|AAF55701.1| 770|Drosophila melanogaster CG4608-PA
protein.
Length = 770
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 353 AGCGKYRSHGPKARRCHHDRQAQSSPQRS 439
AG G R GPKA+RC R+ ++ +R+
Sbjct: 538 AGAGALRKLGPKAKRCKELREKAAAEKRA 566
>X57484-1|CAA40722.1| 264|Drosophila melanogaster tra-2 protein.
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>M76381-1|AAA69686.1| 136|Drosophila melanogaster transformer-2
protein D protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>M30939-3|AAA28955.1| 226|Drosophila melanogaster transformer-2
protein B protein.
Length = 226
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 21 SRSRSSSESPPPEPRHRSGRSSRDR 45
>M30939-2|AAA28957.1| 136|Drosophila melanogaster transformer-2
protein D protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>M30939-1|AAA28954.1| 264|Drosophila melanogaster transformer-2
protein A protein.
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>M23633-1|AAA28953.1| 264|Drosophila melanogaster protein (
D.melanogaster transformer-2 (tra-2) protein mRNA,
complete cds. ).
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>J03155-1|AAA62771.1| 256|Drosophila melanogaster transformer-2
protein.
Length = 256
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 51 SRSRSSSESPPPEPRHRSGRSSRDR 75
>AY128417-1|AAM75010.1| 658|Drosophila melanogaster GH09410p
protein.
Length = 658
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 308 RDL*ELYMSQSFFTTGIMTPSRRRWR 231
RDL E M QS + G+M RRWR
Sbjct: 81 RDLVERQMEQSIYELGVMRVCIRRWR 106
>AY058768-1|AAL13997.1| 264|Drosophila melanogaster SD04329p
protein.
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>AF216664-1|AAF23815.1| 1184|Drosophila melanogaster xmas-2 protein.
Length = 1184
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 308 RDL*ELYMSQSFFTTGIMTPSRRRWR 231
RDL E M QS + G+M RRWR
Sbjct: 607 RDLVERQMEQSIYELGVMRVCIRRWR 632
>AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-PA
protein.
Length = 1370
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 308 RDL*ELYMSQSFFTTGIMTPSRRRWR 231
RDL E M QS + G+M RRWR
Sbjct: 793 RDLVERQMEQSIYELGVMRVCIRRWR 818
>AE013599-1918|AAM68560.1| 136|Drosophila melanogaster CG10128-PB,
isoform B protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>AE013599-1916|AAM68558.1| 226|Drosophila melanogaster CG10128-PD,
isoform D protein.
Length = 226
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 21 SRSRSSSESPPPEPRHRSGRSSRDR 45
>AE013599-1915|AAM68557.1| 226|Drosophila melanogaster CG10128-PC,
isoform C protein.
Length = 226
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 21 SRSRSSSESPPPEPRHRSGRSSRDR 45
>AE013599-1914|AAS64911.1| 264|Drosophila melanogaster CG10128-PG,
isoform G protein.
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>AE013599-1913|AAS64910.1| 264|Drosophila melanogaster CG10128-PF,
isoform F protein.
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>AE013599-1912|AAF58232.2| 264|Drosophila melanogaster CG10128-PA,
isoform A protein.
Length = 264
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 204 SKNVPTKESPPPSPRWRHDASSEER 278
S++ + ESPPP PR R SS +R
Sbjct: 59 SRSRSSSESPPPEPRHRSGRSSRDR 83
>BT025085-1|ABE73256.1| 736|Drosophila melanogaster IP14110p
protein.
Length = 736
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 157 LIYANIFCFVSTEAISLKTFQQKSHRHL 240
++ A + C V T ++ FQ+ HRHL
Sbjct: 293 ILSATLLCLVFTSVCGIQHFQRAGHRHL 320
>AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-PA
protein.
Length = 1698
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 157 LIYANIFCFVSTEAISLKTFQQKSHRHL 240
++ A + C V T ++ FQ+ HRHL
Sbjct: 91 ILSATLLCLVFTSVCGIQHFQRAGHRHL 118
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,529,778
Number of Sequences: 53049
Number of extensions: 501403
Number of successful extensions: 2498
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2497
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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