Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0003X.Seq
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    82   7e-15
UniRef50_Q1IW01 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q5Z6D7 Cluster: Putative uncharacterized protein P0427E...    33   5.8  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    32   7.6  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 82.2 bits (194), Expect = 7e-15
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = -1

Query: 398 FCPSFLATFAGFPRQALNRGLPLGFRFSALRHFDPKKLD 282
           F PSFLATFAGFPRQALNRGLPLGFRFSALRH DPKKLD
Sbjct: 35  FFPSFLATFAGFPRQALNRGLPLGFRFSALRHLDPKKLD 73


>UniRef50_Q1IW01 Cluster: Putative uncharacterized protein; n=1;
           Deinococcus geothermalis DSM 11300|Rep: Putative
           uncharacterized protein - Deinococcus geothermalis
           (strain DSM 11300)
          Length = 171

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 25/76 (32%), Positives = 34/76 (44%)
 Frame = +1

Query: 169 ECCSSLEQESTITERGLQRQRA*NRLSGRGPLREPSP*SSFLGSKCRKALNRNPKGRPRF 348
           E  SS    S + +R +QR+       G  PL +PS  S  LG  CR+A   +   +  +
Sbjct: 32  EVLSSHSHSSGLQDRPVQRRSESPSRDGLLPLNKPSRESRLLGRACRQAHVMSDDSKKPY 91

Query: 349 RA*RGKPANVARKEGQ 396
                 PAN A  EGQ
Sbjct: 92  -----DPANTAPAEGQ 102


>UniRef50_Q5Z6D7 Cluster: Putative uncharacterized protein
           P0427E01.31; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0427E01.31 - Oryza sativa subsp. japonica (Rice)
          Length = 145

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 363 KAGERSEEGRAESDRSWR*GTGKCSGHVRVTTTPAALNAAVKGASGCT 506
           + G R +      + +W  G G+CS  V   +TP     A  GA+GCT
Sbjct: 14  RRGNRPQTAAGGVEGAWLGGRGECSW-VHEASTPGGWEGAAVGAAGCT 60


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   RPSQQLRSCNGEWQIV 49
           RPSQQLRS NGEW+++
Sbjct: 57  RPSQQLRSLNGEWRLM 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,284,930
Number of Sequences: 1657284
Number of extensions: 10503263
Number of successful extensions: 22099
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22097
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)