Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0003X.Seq
         (548 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0038 - 282431-283954                                             28   4.3  
12_02_1090 - 25994366-25995410,25995632-25995971,25997266-25997686     27   7.5  

>08_01_0038 - 282431-283954
          Length = 507

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +1

Query: 7   FPTVAQL*W-RMANCKR*YFVKIRVKFLLNQLIF*PIGRNRQNPL*ITRIDRDRVECCSS 183
           FP++A+L   R   C + Y VK R   LL+QLI     + R + L     + D ++   S
Sbjct: 227 FPSLARLPVVRRLLCAKAYHVKRRWDQLLDQLIDDHASKRRSSMLDNNDEESDFIDVLLS 286

Query: 184 LEQESTITERGLQ 222
           ++QE  +T+  ++
Sbjct: 287 IQQEYGLTKDNIK 299


>12_02_1090 - 25994366-25995410,25995632-25995971,25997266-25997686
          Length = 601

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 508 KVQPDAPFTAALSAAGV 458
           ++ PDAPF+ A SAAG+
Sbjct: 333 EIDPDAPFSVAFSAAGM 349


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,093
Number of Sequences: 37544
Number of extensions: 292800
Number of successful extensions: 652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)